ENSGALG00000006527


Gallus gallus

Features
Gene ID: ENSGALG00000006527
  
Biological name :CRTAM
  
Synonyms : CRTAM / cytotoxic and regulatory T-cell molecule precursor
  
Possible biological names infered from orthology : cytotoxic and regulatory T cell molecule / O95727
  
Species: Gallus gallus
  
Chr. number: 24
Strand: -1
Band:
Gene start: 3121834
Gene end: 3134300
  
Corresponding Affymetrix probe sets: Gga.972.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010537
NCBI entrez gene - 395342     See in Manteia.
RefSeq - NM_001030347
RefSeq Peptide - NP_001025518
swissprot - F1NWM4
Ensembl - ENSGALG00000006527
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX120005.1ENSDARG00000089327Danio rerio
 CRTAMENSG00000109943Homo sapiens
 CrtamENSMUSG00000032021Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CADM1 / cell adhesion molecule 1 / Q8R5M8* / Q9BY67*ENSGALG0000001458217
CADM2 / cell adhesion molecule 2 / Q8BLQ9* / Q8N3J6*ENSGALG0000004339315
NECTIN1 / nectin cell adhesion molecule 1 / Q15223* / Q9JKF6*ENSGALG0000003919612
NECTIN3 / nectin cell adhesion molecule 3 / Q9JLB9* / Q9NQS3*ENSGALG0000001536712
CADM3 / cell adhesion molecule 3 / Q8N126* / Q99N28*ENSGALG000000369259


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013162  CD80-like, immunoglobulin C2-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002355 detection of tumor cell IEA
 biological_processGO:0002860 positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IBA
 biological_processGO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IBA
 biological_processGO:0008037 cell recognition IEA
 biological_processGO:0045954 positive regulation of natural killer cell mediated cytotoxicity IEA
 biological_processGO:0050715 positive regulation of cytokine secretion IEA
 biological_processGO:0051606 detection of stimulus IEA
 biological_processGO:0070669 response to interleukin-2 IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0005913 cell-cell adherens junction IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IBA
 molecular_functionGO:0050839 cell adhesion molecule binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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