ENSGALG00000039196


Gallus gallus

Features
Gene ID: ENSGALG00000039196
  
Biological name :NECTIN1
  
Synonyms : NECTIN1 / nectin cell adhesion molecule 1
  
Possible biological names infered from orthology : Q15223 / Q9JKF6
  
Species: Gallus gallus
  
Chr. number: 24
Strand: 1
Band:
Gene start: 4031766
Gene end: 4073048
  
Corresponding Affymetrix probe sets: GgaAffx.4194.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057900
swissprot - A0A1D5PY51
Ensembl - ENSGALG00000039196
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nectin1aENSDARG00000069767Danio rerio
 nectin1bENSDARG00000086034Danio rerio
 Q15223ENSG00000110400Homo sapiens
 Q9JKF6ENSMUSG00000032012Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NECTIN3 / nectin cell adhesion molecule 3 / Q9JLB9* / Q9NQS3*ENSGALG0000001536726
CADM2 / cell adhesion molecule 2 / Q8BLQ9* / Q8N3J6*ENSGALG0000004339315
CADM1 / cell adhesion molecule 1 / Q8R5M8* / Q9BY67*ENSGALG0000001458213
CRTAM / cytotoxic and regulatory T-cell molecule precursor / O95727* / cytotoxic and regulatory T cell molecule*ENSGALG0000000652712
CADM3 / cell adhesion molecule 3 / Q8N126* / Q99N28*ENSGALG000000369259


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002089 lens morphogenesis in camera-type eye IEA
 biological_processGO:0002934 desmosome organization IEA
 biological_processGO:0006826 iron ion transport IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 biological_processGO:0046718 viral entry into host cell IEA
 biological_processGO:0048593 camera-type eye morphogenesis IEA
 biological_processGO:0051963 regulation of synapse assembly IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:0070166 enamel mineralization IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 biological_processGO:1902414 protein localization to cell junction IEA
 cellular_componentGO:0005912 adherens junction IEA
 cellular_componentGO:0005913 cell-cell adherens junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043296 apical junction complex IEA
 cellular_componentGO:0044291 cell-cell contact zone IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0050839 cell adhesion molecule binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions
Nectin/Necl trans heterodimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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