ENSGALG00000014582


Gallus gallus

Features
Gene ID: ENSGALG00000014582
  
Biological name :CADM1
  
Synonyms : CADM1 / cell adhesion molecule 1
  
Possible biological names infered from orthology : Q8R5M8 / Q9BY67
  
Species: Gallus gallus
  
Chr. number: 24
Strand: -1
Band:
Gene start: 4670461
Gene end: 4826288
  
Corresponding Affymetrix probe sets: Gga.17594.1.S1_a_at (Chicken Array)   Gga.5291.1.S1_at (Chicken Array)   GgaAffx.22126.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045094
Ensembl peptide - ENSGALP00000062711
Ensembl peptide - ENSGALP00000048321
Ensembl peptide - ENSGALP00000048243
Ensembl peptide - ENSGALP00000023468
NCBI entrez gene - 419762     See in Manteia.
RefSeq - XM_015298224
RefSeq - XM_015298219
RefSeq - XM_015298220
RefSeq - XM_015298221
RefSeq - XM_015298222
RefSeq - XM_015298223
RefSeq - XM_015298214
RefSeq - XM_015298215
RefSeq - XM_015298216
RefSeq - XM_015298217
RefSeq - XM_015298218
swissprot - A0A1L1RV59
swissprot - A0A1D5P6J4
swissprot - A0A1D5P6B8
swissprot - F1N824
swissprot - A0A1D5NXJ7
Ensembl - ENSGALG00000014582
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cadm1aENSDARG00000031075Danio rerio
 cadm1bENSDARG00000042677Danio rerio
 CADM1ENSG00000182985Homo sapiens
 Cadm1ENSMUSG00000032076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CADM2 / cell adhesion molecule 2 / Q8BLQ9* / Q8N3J6*ENSGALG0000004339340
CADM3 / cell adhesion molecule 3 / Q8N126* / Q99N28*ENSGALG0000003692527
NECTIN3 / nectin cell adhesion molecule 3 / Q9JLB9* / Q9NQS3*ENSGALG0000001536719
CRTAM / cytotoxic and regulatory T-cell molecule precursor / O95727* / cytotoxic and regulatory T cell molecule*ENSGALG0000000652716
NECTIN1 / nectin cell adhesion molecule 1 / Q15223* / Q9JKF6*ENSGALG0000003919612


Protein motifs (from Interpro)
Interpro ID Name
 IPR003585  Neurexin/syndecan/glycophorin C
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013162  CD80-like, immunoglobulin C2-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IBA
 biological_processGO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IBA
 biological_processGO:0008037 cell recognition IEA
 biological_processGO:0042271 susceptibility to natural killer cell mediated cytotoxicity IEA
 biological_processGO:0045954 positive regulation of natural killer cell mediated cytotoxicity IEA
 biological_processGO:0050715 positive regulation of cytokine secretion IEA
 biological_processGO:0051606 detection of stimulus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0005913 cell-cell adherens junction IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0034987 immunoglobulin receptor binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IBA
 molecular_functionGO:0050839 cell adhesion molecule binding IBA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions
Nectin/Necl trans heterodimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr