ENSGALG00000007527


Gallus gallus

Features
Gene ID: ENSGALG00000007527
  
Biological name :ADARB1
  
Synonyms : ADARB1 / adenosine deaminase, RNA specific B1
  
Possible biological names infered from orthology : Double-stranded RNA-specific editase 1 / P78563 / Q91ZS8
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 7251087
Gene end: 7327581
  
Corresponding Affymetrix probe sets: Gga.13806.1.S1_at (Chicken Array)   Gga.19384.1.S1_at (Chicken Array)   Gga.2137.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055721
Ensembl peptide - ENSGALP00000062080
Ensembl peptide - ENSGALP00000038745
Ensembl peptide - ENSGALP00000044819
Ensembl peptide - ENSGALP00000048854
NCBI entrez gene - 374087     See in Manteia.
RefSeq - XM_015289083
RefSeq - NM_204240
RefSeq - XM_015289076
RefSeq - XM_015289077
RefSeq - XM_015289078
RefSeq - XM_015289081
RefSeq - XM_015289082
RefSeq - NM_001111074
RefSeq Peptide - NP_001104544
RefSeq Peptide - NP_989571
swissprot - A0A1D5PS41
swissprot - Q90VZ5
swissprot - A0A1D5NWS7
swissprot - Q90VU9
Ensembl - ENSGALG00000007527
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 adarb1aENSDARG00000041609Danio rerio
 adarb1bENSDARG00000003544Danio rerio
 ADARB1ENSG00000197381Homo sapiens
 Adarb1ENSMUSG00000020262Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ADARB2 / adenosine deaminase, RNA specific B2 (inactive) / Q9JI20* / Q9NS39* / adenosine deaminase, RNA-specific, B2*ENSGALG0000000679742
ADAR / adenosine deaminase, RNA specific / P55265* / Q99MU3* / Mus musculus adenosine deaminase, RNA-specific (Adar), transcript variant 4, mRNA.*ENSGALG0000002147530
ADAD1 / adenosine deaminase domain containing 1 / Q5SUE7* / Q96M93* / Adenosine deaminase domain-containing protein 1 *ENSGALG0000004499519
ADAT1 / tRNA-specific adenosine deaminase 1 / Q9BUB4* / Q9JHI2* / adenosine deaminase, tRNA specific 1* / Mus musculus adenosine deaminase, tRNA-specific 1 (Adat1), transcript variant 3, mRNA.*ENSGALG0000000090816


Protein motifs (from Interpro)
Interpro ID Name
 IPR002466  Adenosine deaminase/editase
 IPR014720  Double-stranded RNA-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006382 adenosine to inosine editing IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0007274 neuromuscular synaptic transmission IEA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0021610 facial nerve morphogenesis IEA
 biological_processGO:0021618 hypoglossal nerve morphogenesis IEA
 biological_processGO:0021965 spinal cord ventral commissure morphogenesis IEA
 biological_processGO:0030336 negative regulation of cell migration IEA
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0044387 negative regulation of protein kinase activity by regulation of protein phosphorylation IEA
 biological_processGO:0045070 positive regulation of viral genome replication IEA
 biological_processGO:0050884 neuromuscular process controlling posture IEA
 biological_processGO:0051726 regulation of cell cycle IEA
 biological_processGO:0060384 innervation IEA
 biological_processGO:0060415 muscle tissue morphogenesis IEA
 biological_processGO:0061744 motor behavior IEA
 biological_processGO:0097049 motor neuron apoptotic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004000 adenosine deaminase activity IEA


Pathways (from Reactome)
Pathway description
C6 deamination of adenosine
Formation of editosomes by ADAR proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000007527 ADARB1 / adenosine deaminase, RNA specific B1 / P78563* / Q91ZS8* / Double-stranded RNA-specific editase 1 *  / complex / reaction






 

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