ENSGALG00000008282


Gallus gallus

Features
Gene ID: ENSGALG00000008282
  
Biological name :ATG4A
  
Synonyms : ATG4A / cysteine protease ATG4A isoform 2
  
Possible biological names infered from orthology : Atg4a-ps / autophagy related 4A cysteine peptidase / autophagy related 4A, pseudogene / Cysteine protease ATG4A / Q8C9S8 / Q8WYN0
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 14154500
Gene end: 14166280
  
Corresponding Affymetrix probe sets: Gga.10631.1.S1_at (Chicken Array)   GgaAffx.12770.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013462
Ensembl peptide - ENSGALP00000063787
NCBI entrez gene - 772074     See in Manteia.
RefSeq - XM_015278325
RefSeq - NM_001271986
RefSeq - NM_001271987
RefSeq Peptide - NP_001258915
RefSeq Peptide - NP_001258916
swissprot - A0A1I7Q405
swissprot - A0A1L1RY59
Ensembl - ENSGALG00000008282
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atg4aENSDARG00000014531Danio rerio
 ATG4AENSG00000101844Homo sapiens
 Atg4aENSMUSG00000079418Mus musculus
 Atg4a-psENSMUSG00000087119Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ATG4B / Q6PZ02 / Cysteine protease ATG4B / Q9Y4P1* / autophagy related 4B cysteine peptidase*ENSGALG0000000629854
ATG4C / autophagy related 4C cysteine peptidase / Q811C2* / Q96DT6* / Cysteine protease ATG4C *ENSGALG0000001098529


Protein motifs (from Interpro)
Interpro ID Name
 IPR005078  Peptidase C54
 IPR033474  Autophagin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0004197 cysteine-type endopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr