ENSGALG00000010985


Gallus gallus

Features
Gene ID: ENSGALG00000010985
  
Biological name :ATG4C
  
Synonyms : ATG4C / autophagy related 4C cysteine peptidase
  
Possible biological names infered from orthology : Cysteine protease ATG4C / Q811C2 / Q96DT6
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 27684401
Gene end: 27706441
  
Corresponding Affymetrix probe sets: GgaAffx.6952.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017873
Ensembl peptide - ENSGALP00000057370
Ensembl peptide - ENSGALP00000052261
NCBI entrez gene - 424688     See in Manteia.
RefSeq - XM_004936862
RefSeq - XM_015291126
RefSeq - XM_422520
swissprot - E1BS34
swissprot - A0A1D5PWN4
swissprot - A0A1D5PHI2
Ensembl - ENSGALG00000010985
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atg4cENSDARG00000044373Danio rerio
 ATG4CENSG00000125703Homo sapiens
 Atg4cENSMUSG00000028550Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ATG4B / Q6PZ02 / Cysteine protease ATG4B / Q9Y4P1* / autophagy related 4B cysteine peptidase*ENSGALG0000000629824
ATG4A / cysteine protease ATG4A isoform 2 / Q8WYN0* / Q8C9S8* / Atg4a-ps* / Cysteine protease ATG4A * / autophagy related 4A, pseudogene* / autophagy related 4A cysteine peptidase*ENSGALG0000000828224


Protein motifs (from Interpro)
Interpro ID Name
 IPR005078  Peptidase C54
 IPR032915  Cysteine protease ATG4C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006501 C-terminal protein lipidation IBA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006612 protein targeting to membrane IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0044804 autophagy of nucleus IBA
 biological_processGO:0051697 protein delipidation IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0004197 cysteine-type endopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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