ENSGALG00000008793


Gallus gallus

Features
Gene ID: ENSGALG00000008793
  
Biological name :SEC23B
  
Synonyms : protein transport protein Sec23A / SEC23B
  
Possible biological names infered from orthology : Mus musculus SEC23 homolog B, COPII coat complex component (Sec23b), transcript variant 7, mRNA. / Q15437 / Q9D662 / Sec23 homolog B, coat complex II component
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 15379851
Gene end: 15396464
  
Corresponding Affymetrix probe sets: Gga.5716.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014280
NCBI entrez gene - 416724     See in Manteia.
RefSeq - XM_015283478
RefSeq - NM_001006179
RefSeq - XM_015283476
RefSeq - XM_015283477
RefSeq - XM_015283475
RefSeq Peptide - NP_001006179
swissprot - A0A1I7Q406
Ensembl - ENSGALG00000008793
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sec23bENSDARG00000019360Danio rerio
 Q15437ENSG00000101310Homo sapiens
 Q9D662ENSMUSG00000027429Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEC23A / Sec23 homolog A, coat complex II component / Q01405* / Q15436* / Protein transport protein Sec23A *ENSGALG0000001015085


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR006895  Zinc finger, Sec23/Sec24-type
 IPR006896  Sec23/Sec24, trunk domain
 IPR006900  Sec23/Sec24, helical domain
 IPR007123  Gelsolin-like domain
 IPR012990  Sec23/Sec24 beta-sandwich
 IPR029006  ADF-H/Gelsolin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0090114 COPII-coated vesicle budding IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0030127 COPII vesicle coat IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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