ENSGALG00000009526


Gallus gallus

Features
Gene ID: ENSGALG00000009526
  
Biological name :VTI1B
  
Synonyms : vesicle transport through interaction with t-SNAREs 1B / VTI1B
  
Possible biological names infered from orthology : Q9UEU0
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 28894645
Gene end: 28902623
  
Corresponding Affymetrix probe sets: Gga.8117.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015493
Ensembl peptide - ENSGALP00000063389
NCBI entrez gene - 423273     See in Manteia.
RefSeq - XM_421192
swissprot - A0A1L1RX24
swissprot - E1BUX5
Ensembl - ENSGALG00000009526
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vti1bENSDARG00000039270Danio rerio
 VTI1BENSG00000100568Homo sapiens
 Vti1bENSMUSG00000021124Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VTI1A / vesicle transport through interaction with t-SNAREs 1A / O89116* / Q96AJ9*ENSGALG0000000888027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR007705  Vesicle transport v-SNARE, N-terminal
 IPR010989  SNARE


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006623 protein targeting to vacuole IBA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport IBA
 biological_processGO:0006896 Golgi to vacuole transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IBA
 biological_processGO:0048280 vesicle fusion with Golgi apparatus IBA
 biological_processGO:1903076 regulation of protein localization to plasma membrane IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0012507 ER to Golgi transport vesicle membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0055037 recycling endosome IEA
 cellular_componentGO:0055038 recycling endosome membrane IEA
 molecular_functionGO:0000149 SNARE binding IEA
 molecular_functionGO:0005484 SNAP receptor activity IBA
 molecular_functionGO:0019869 chloride channel inhibitor activity IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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