ENSGALG00000009961


Gallus gallus

Features
Gene ID: ENSGALG00000009961
  
Biological name :ABCE1
  
Synonyms : ABCE1 / ATP binding cassette subfamily E member 1
  
Possible biological names infered from orthology : ATP-binding cassette, sub-family E (OABP), member 1 / P61221 / P61222
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 31263928
Gene end: 31277981
  
Corresponding Affymetrix probe sets: GgaAffx.12411.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052885
Ensembl peptide - ENSGALP00000063569
Ensembl peptide - ENSGALP00000063462
Ensembl peptide - ENSGALP00000060135
Ensembl peptide - ENSGALP00000016175
NCBI entrez gene - 422462     See in Manteia.
RefSeq - NM_001006440
RefSeq Peptide - NP_001006440
swissprot - A0A1L1RX85
swissprot - A0A1D5PJ93
swissprot - A0A1L1RXK1
swissprot - Q2UXM6
swissprot - Q5ZJX6
Ensembl - ENSGALG00000009961
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abce1ENSDARG00000007216Danio rerio
 ABCE1ENSG00000164163Homo sapiens
 Abce1ENSMUSG00000058355Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR007209  RNase L inhibitor RLI, possible metal-binding domain
 IPR013283  RLI1
 IPR017871  ABC transporter, conserved site
 IPR017896  4Fe-4S ferredoxin-type, iron-sulphur binding domain
 IPR017900  4Fe-4S ferredoxin, iron-sulphur binding, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000054 ribosomal subunit export from nucleus IBA
 biological_processGO:0006413 translational initiation IBA
 biological_processGO:0006415 translational termination IBA
 biological_processGO:0060702 negative regulation of endoribonuclease activity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005506 iron ion binding IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0043024 ribosomal small subunit binding IBA
 molecular_functionGO:0060698 endoribonuclease inhibitor activity IEA


Pathways (from Reactome)
Pathway description
Interferon alpha/beta signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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