ENSMUSG00000058355


Mus musculus

Features
Gene ID: ENSMUSG00000058355
  
Biological name :Abce1
  
Synonyms : Abce1 / ATP-binding cassette, sub-family E (OABP), member 1 / P61222
  
Possible biological names infered from orthology : ATP binding cassette subfamily E member 1 / P61221
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: C1
Gene start: 79683462
Gene end: 79711740
  
Corresponding Affymetrix probe sets: 10579874 (MoGene1.0st)   1416014_at (Mouse Genome 430 2.0 Array)   1416015_s_at (Mouse Genome 430 2.0 Array)   1442071_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000079379
NCBI entrez gene - 24015     See in Manteia.
MGI - MGI:1195458
RefSeq - NM_015751
RefSeq Peptide - NP_056566
swissprot - P61222
swissprot - Q3UHY8
Ensembl - ENSMUSG00000058355
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abce1ENSDARG00000007216Danio rerio
 ABCE1ENSGALG00000009961Gallus gallus
 ABCE1ENSG00000164163Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR007209  RNase L inhibitor RLI, possible metal-binding domain
 IPR013283  RLI1
 IPR017871  ABC transporter, conserved site
 IPR017896  4Fe-4S ferredoxin-type, iron-sulphur binding domain
 IPR017900  4Fe-4S ferredoxin, iron-sulphur binding, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR034348  RLI, domain 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000054 ribosomal subunit export from nucleus IBA
 biological_processGO:0006413 translational initiation IBA
 biological_processGO:0006415 translational termination IBA
 biological_processGO:0060702 negative regulation of endoribonuclease activity IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005506 iron ion binding IBA
 molecular_functionGO:0005524 ATP binding IBA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0043024 ribosomal small subunit binding IBA
 molecular_functionGO:0060698 endoribonuclease inhibitor activity IEA


Pathways (from Reactome)
Pathway description
Interferon alpha/beta signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011096 complete embryonic lethality before somite formation "death of all organisms of a given genotype in a population between the point of implantation and somite formation (Mus: E4.5 to less than E8)" [MGI:csmith]
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Allelic Composition: Lmx1atm1Ics/Lmx1atm1Ics,Lmx1btm1Rjo/Lmx1b+
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000066800 Q05921 / Rnasel / ribonuclease L (2, 5-oligoisoadenylate synthetase-dependent) / Q05823* / ribonuclease L*  / reaction / complex






 

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