ENSG00000164163


Homo sapiens

Features
Gene ID: ENSG00000164163
  
Biological name :ABCE1
  
Synonyms : ABCE1 / ATP binding cassette subfamily E member 1 / P61221
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q31.21
Gene start: 145097932
Gene end: 145129179
  
Corresponding Affymetrix probe sets: 201872_s_at (Human Genome U133 Plus 2.0 Array)   201873_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000421250
Ensembl peptide - ENSP00000423415
Ensembl peptide - ENSP00000422068
Ensembl peptide - ENSP00000296577
NCBI entrez gene - 6059     See in Manteia.
OMIM - 601213
RefSeq - NM_002940
RefSeq - NM_001040876
RefSeq Peptide - NP_001035809
RefSeq Peptide - NP_002931
swissprot - P61221
swissprot - D6R9I9
swissprot - H0Y990
swissprot - D6RGF4
Ensembl - ENSG00000164163
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abce1ENSDARG00000007216Danio rerio
 ABCE1ENSGALG00000009961Gallus gallus
 Abce1ENSMUSG00000058355Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR007209  RNase L inhibitor RLI, possible metal-binding domain
 IPR013283  RLI1
 IPR017871  ABC transporter, conserved site
 IPR017896  4Fe-4S ferredoxin-type, iron-sulphur binding domain
 IPR017900  4Fe-4S ferredoxin, iron-sulphur binding, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR034348  RLI, domain 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000054 ribosomal subunit export from nucleus IBA
 biological_processGO:0006413 translational initiation IBA
 biological_processGO:0006415 translational termination IBA
 biological_processGO:0016032 viral process IEA
 biological_processGO:0060338 regulation of type I interferon-mediated signaling pathway TAS
 biological_processGO:0060702 negative regulation of endoribonuclease activity IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IBA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005506 iron ion binding IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0043024 ribosomal small subunit binding IBA
 molecular_functionGO:0060698 endoribonuclease inhibitor activity IDA


Pathways (from Reactome)
Pathway description
Interferon alpha/beta signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000135828 Q05823 / RNASEL / ribonuclease L  / complex / reaction






 

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