ENSGALG00000010689


Gallus gallus

Features
Gene ID: ENSGALG00000010689
  
Biological name :MAGOH
  
Synonyms : MAGOH / P50594 / Protein mago nashi homolog
  
Possible biological names infered from orthology : MAGOHB / mago homolog B, exon junction complex core component / Q96A72
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 24728295
Gene end: 24730377
  
Corresponding Affymetrix probe sets: Gga.1861.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017367
Ensembl peptide - ENSGALP00000062338
Ensembl peptide - ENSGALP00000061989
Ensembl peptide - ENSGALP00000061034
NCBI entrez gene - 374226     See in Manteia.
RefSeq - NM_204325
RefSeq - NM_001308098
RefSeq Peptide - NP_001295027
RefSeq Peptide - NP_989656
swissprot - P50594
swissprot - A0A1L1RT49
swissprot - A0A1L1RQG5
swissprot - A0A1L1RU43
Ensembl - ENSGALG00000010689
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 magohENSDARG00000038635Danio rerio
 MAGOHBENSG00000111196Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004023  Mago nashi protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IBA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0035145 exon-exon junction complex IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3-end processing
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000008530 Q5ZM36 / EIF4A3 / Eukaryotic initiation factor 4A-III / Q91VC3* / Gm5580* / Gm8994* / P38919* / eukaryotic translation initiation factor 4A3* / Eukaryotic initiation factor 4A-III Eukaryot...  / complex
 ENSGALG00000016815 UPF3A / UPF3A, regulator of nonsense mediated mRNA decay / Q9H1J1* / UPF3 regulator of nonsense transcripts homolog A (yeast)*  / complex
 ENSGALG00000031813 CASC3 / cancer susceptibility 3 / O15234* / Q8K3W3* / Protein CASC3 *  / complex
 ENSGALG00000033772 UPF2 / UPF2, regulator of nonsense mediated mRNA decay / Q9HAU5* / UPF2 regulator of nonsense transcripts homolog (yeast)*  / complex
 ENSGALG00000009288 RNPS1 / RNA binding protein with serine rich domain 1 / Q15287* / Q99M28*  / complex






 

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