ENSGALG00000011211


Gallus gallus

Features
Gene ID: ENSGALG00000011211
  
Biological name :HACL1
  
Synonyms : 2-hydroxyacyl-CoA lyase 1 / HACL1
  
Possible biological names infered from orthology : Q9QXE0 / Q9UJ83
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 34070530
Gene end: 34089325
  
Corresponding Affymetrix probe sets: Gga.10165.1.S1_at (Chicken Array)   Gga.13434.1.S1_at (Chicken Array)   GgaAffx.7120.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061907
Ensembl peptide - ENSGALP00000018260
NCBI entrez gene - 420638     See in Manteia.
RefSeq - XM_015281477
RefSeq - XM_015281474
RefSeq - XM_015281475
RefSeq - XM_015281476
RefSeq - NM_001199628
RefSeq - XM_015281473
RefSeq Peptide - NP_001186557
swissprot - F1NYG7
swissprot - A0A1L1RSW8
Ensembl - ENSGALG00000011211
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hacl1ENSDARG00000020529Danio rerio
 HACL1ENSG00000131373Homo sapiens
 Hacl1ENSMUSG00000021884Mus musculus
 Hacl1ENSMUSG00000115022Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011766  Thiamine pyrophosphate enzyme, C-terminal TPP-binding
 IPR012000  Thiamine pyrophosphate enzyme, central domain
 IPR012001  Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
 IPR029035  DHS-like NAD/FAD-binding domain superfamily
 IPR029061  Thiamin diphosphate-binding fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001561 fatty acid alpha-oxidation IEA
 biological_processGO:0051259 protein complex oligomerization IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0016830 carbon-carbon lyase activity IEA
 molecular_functionGO:0030976 thiamine pyrophosphate binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0048037 cofactor binding IEA


Pathways (from Reactome)
Pathway description
Alpha-oxidation of phytanate
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000011211 HACL1 / 2-hydroxyacyl-CoA lyase 1 / Q9QXE0* / Q9UJ83*  / complex






 

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