ENSGALG00000013160


Gallus gallus

Features
Gene ID: ENSGALG00000013160
  
Biological name :CHMP5
  
Synonyms : charged multivesicular body protein 5 / CHMP5
  
Possible biological names infered from orthology : Q9D7S9 / Q9NZZ3
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 85916370
Gene end: 85925033
  
Corresponding Affymetrix probe sets: Gga.12705.1.A1_at (Chicken Array)   Gga.12705.1.S1_at (Chicken Array)   Gga.5470.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021459
Ensembl peptide - ENSGALP00000058118
NCBI entrez gene - 420968     See in Manteia.
RefSeq - NM_001277399
RefSeq Peptide - NP_001264328
swissprot - E1BSI4
swissprot - A0A1D5PYR3
Ensembl - ENSGALG00000013160
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chmp5aENSDARG00000038855Danio rerio
 chmp5bENSDARG00000103718Danio rerio
 CHMP5ENSG00000086065Homo sapiens
 Chmp5ENSMUSG00000028419Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005024  Snf7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000920 cell separation after cytokinesis IEA
 biological_processGO:0001919 regulation of receptor recycling IEA
 biological_processGO:0006997 nucleus organization IEA
 biological_processGO:0007034 vacuolar transport IEA
 biological_processGO:0007040 lysosome organization IEA
 biological_processGO:0007080 mitotic metaphase plate congression IEA
 biological_processGO:0008333 endosome to lysosome transport IEA
 biological_processGO:0010824 regulation of centrosome duplication IEA
 biological_processGO:0046755 viral budding IEA
 biological_processGO:0071985 multivesicular body sorting pathway IEA
 biological_processGO:1901673 regulation of mitotic spindle assembly IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000012879 VPS4B / vacuolar protein sorting 4 homolog B / O75351* / P46467* / vacuolar protein sorting 4B*  / complex
 ENSGALG00000013810 VTA1 / vesicle trafficking 1 / Q9CR26* / Q9NP79* / vesicle (multivesicular body) trafficking 1*  / complex
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction






 

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