ENSGALG00000014678


Gallus gallus

Features
Gene ID: ENSGALG00000014678
  
Biological name :ELL2
  
Synonyms : ELL2 / elongation factor for RNA polymerase II 2
  
Possible biological names infered from orthology : O00472 / Q3UKU1 / RNA polymerase II elongation factor ELL2
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 57266068
Gene end: 57319138
  
Corresponding Affymetrix probe sets: Gga.13517.1.S1_at (Chicken Array)   GgaAffx.9296.1.S1_at (Chicken Array)   GgaAffx.9296.2.S1_at (Chicken Array)   GgaAffx.9296.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023605
Ensembl peptide - ENSGALP00000058133
Ensembl peptide - ENSGALP00000046306
NCBI entrez gene - 427119     See in Manteia.
RefSeq - XM_004949382
RefSeq - XM_015280540
RefSeq - XM_424711
swissprot - A0A1D5PYS8
swissprot - A0A1D5P0X6
swissprot - F1NBA3
Ensembl - ENSGALG00000014678
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ell2ENSDARG00000006251Danio rerio
 ELL2ENSG00000118985Homo sapiens
 Ell2ENSMUSG00000001542Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ELL / elongation factor for RNA polymerase II / O08856* / P55199* / RNA polymerase II elongation factor ELL *ENSGALG0000003351345
MARVELD2 / MARVEL domain containing 2 / Q3UZP0* / Q8N4S9* / MARVEL domain-containing protein 2 *ENSGALG0000002714011
OCEL1* / Q9H607* / occludin/ELL domain containing 1*ENSGALG000000314908


Protein motifs (from Interpro)
Interpro ID Name
 IPR010844  Occludin homology domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR019464  RNA polymerase II elongation factor ELL, N-terminal
 IPR031176  ELL/occludin family
 IPR031179  RNA polymerase II elongation factor ELL2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006368 transcription elongation from RNA polymerase II promoter IEA
 biological_processGO:0042795 snRNA transcription by RNA polymerase II IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0008023 transcription elongation factor complex IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000008269 ZC3H6 / ZC3H4* / ZC3H8* / Q9JJ48* / Q9UPT8* / Q8BYK8* / P61129* / Q8N5P1* / zinc finger CCCH-type containing 4* / zinc finger CCCH-type containing 6* / zinc finger CCCH-type containing 8*  / complex






 

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