ENSGALG00000014853


Gallus gallus

Features
Gene ID: ENSGALG00000014853
  
Biological name :CLVS2
  
Synonyms : clavesin 2 / CLVS2
  
Possible biological names infered from orthology : Q5SYC1 / Q8BG92
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 61257934
Gene end: 61307258
  
Corresponding Affymetrix probe sets: GgaAffx.9436.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023925
NCBI entrez gene - 428616     See in Manteia.
RefSeq - XM_426173
swissprot - E1C6S0
Ensembl - ENSGALG00000014853
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLVS2ENSG00000146352Homo sapiens
 Clvs2ENSMUSG00000019785Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TTPAL / alpha-tocopherol transfer protein-like / Q9BTX7* / Q9D3D0* / tocopherol (alpha) transfer protein-like*ENSGALG0000000424435
RLBP1 / retinaldehyde binding protein 1 / P12271* / Q9Z275*ENSGALG0000000667634
TTPA / alpha tocopherol transfer protein / P49638* / Q8BWP5* / tocopherol (alpha) transfer protein*ENSGALG0000003003123


Protein motifs (from Interpro)
Interpro ID Name
 IPR001251  CRAL-TRIO lipid binding domain
 IPR011074  CRAL/TRIO, N-terminal domain
 IPR028636  Clavesin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007040 lysosome organization IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0030136 clathrin-coated vesicle IEA
 molecular_functionGO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEA


Pathways (from Reactome)
Pathway description
Lysosome Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000005171 AP1S3 / adaptor related protein complex 1 sigma 3 subunit / Q7TN05* / Q96PC3* / AP-1 complex subunit sigma-3 *  / complex
 ENSGALG00000042213 AP1B1 / adaptor related protein complex 1 beta 1 subunit / O35643* / Q10567* / Mus musculus adaptor protein complex AP-1, beta 1 subunit (Ap1b1), transcript variant 4, mRNA.*  / complex
 ENSGALG00000005139 CLTC / clathrin heavy chain / Q00610*  / complex
 ENSGALG00000016551 AP1S2 / AP-1 complex subunit sigma-2 / P56377* / Q9DB50* / adaptor related protein complex 1 sigma 2 subunit*  / complex






 

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