ENSGALG00000042213


Gallus gallus

Features
Gene ID: ENSGALG00000042213
  
Biological name :AP1B1
  
Synonyms : adaptor related protein complex 1 beta 1 subunit / AP1B1
  
Possible biological names infered from orthology : Mus musculus adaptor protein complex AP-1, beta 1 subunit (Ap1b1), transcript variant 4, mRNA. / O35643 / Q10567
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 11196579
Gene end: 11208691
  
Corresponding Affymetrix probe sets: Gga.14183.1.A1_at (Chicken Array)   Gga.7067.1.S1_at (Chicken Array)   Gga.7067.2.S1_s_at (Chicken Array)   GgaAffx.5096.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045874
Ensembl peptide - ENSGALP00000057665
Ensembl peptide - ENSGALP00000049082
NCBI entrez gene - 417021     See in Manteia.
RefSeq - XM_004934472
RefSeq - XM_004934469
RefSeq - XM_004934470
RefSeq - XM_004934471
RefSeq - XM_004934468
swissprot - A0A1D5P8N3
swissprot - A0A1D5NZQ6
swissprot - A0A1D5PXH0
Ensembl - ENSGALG00000042213
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ap1b1ENSDARG00000020621Danio rerio
 AP1B1ENSG00000100280Homo sapiens
 Ap1b1ENSMUSG00000009090Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AP2B1 / adaptor related protein complex 2 beta 1 subunit / P63010* / Q9DBG3* / AP-2 complex subunit beta *ENSGALG0000004212584
AP4B1 / AP-4 complex subunit beta-1 / Q9WV76* / Q9Y6B7* / Gm43064* / adaptor related protein complex 4 beta 1 subunit*ENSGALG0000003529514


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR002553  Clathrin/coatomer adaptor, adaptin-like, N-terminal
 IPR008152  Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
 IPR009028  Coatomer/calthrin adaptor appendage, C-terminal subdomain
 IPR011989  Armadillo-like helical
 IPR012295  TBP domain superfamily
 IPR013037  Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain
 IPR013041  Clathrin adaptor, appendage, Ig-like subdomain superfamily
 IPR015151  Beta-adaptin appendage, C-terminal subdomain
 IPR016024  Armadillo-type fold
 IPR016342  AP-1/2/4 complex subunit beta
 IPR026739  AP complex subunit beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030117 membrane coat IEA
 cellular_componentGO:0030131 clathrin adaptor complex IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0030276 clathrin binding IEA


Pathways (from Reactome)
Pathway description
MHC class II antigen presentation
Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000004594 CD74 / CD74 molecule / P04233* / P04441* / CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)*  / complex
 ENSGALG00000005171 AP1S3 / adaptor related protein complex 1 sigma 3 subunit / Q7TN05* / Q96PC3* / AP-1 complex subunit sigma-3 *  / complex
 ENSGALG00000005139 CLTC / clathrin heavy chain / Q00610*  / complex
 ENSGALG00000015326 CLTA / clathrin light chain A / P09496*  / complex
 ENSGALG00000016551 AP1S2 / AP-1 complex subunit sigma-2 / P56377* / Q9DB50* / adaptor related protein complex 1 sigma 2 subunit*  / complex
 ENSGALG00000014853 CLVS2 / clavesin 2 / Q5SYC1* / Q8BG92*  / complex






 

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