ENSGALG00000035295


Gallus gallus

Features
Gene ID: ENSGALG00000035295
  
Biological name :AP4B1
  
Synonyms : AP4B1 / AP-4 complex subunit beta-1
  
Possible biological names infered from orthology : adaptor related protein complex 4 beta 1 subunit / Gm43064 / Q9WV76 / Q9Y6B7
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 3763580
Gene end: 3770447
  
Corresponding Affymetrix probe sets: Gga.5447.1.S1_at (Chicken Array)   GgaAffx.12624.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046133
Ensembl peptide - ENSGALP00000055133
Ensembl peptide - ENSGALP00000052965
NCBI entrez gene - 419879     See in Manteia.
RefSeq - NM_001030917
RefSeq Peptide - NP_001026088
swissprot - A0A1D5PQH0
swissprot - A0A1D5PJH1
swissprot - A0A1D5P0F5
Ensembl - ENSGALG00000035295
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ap4b1ENSDARG00000013726Danio rerio
 AP4B1ENSG00000134262Homo sapiens
 Ap4b1ENSMUSG00000032952Mus musculus
 Gm43064ENSMUSG00000105053Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AP1B1 / adaptor related protein complex 1 beta 1 subunit / O35643* / Q10567* / Mus musculus adaptor protein complex AP-1, beta 1 subunit (Ap1b1), transcript variant 4, mRNA.*ENSGALG0000004221324
AP2B1 / adaptor related protein complex 2 beta 1 subunit / P63010* / Q9DBG3* / AP-2 complex subunit beta *ENSGALG0000004212524


Protein motifs (from Interpro)
Interpro ID Name
 IPR002553  Clathrin/coatomer adaptor, adaptin-like, N-terminal
 IPR011989  Armadillo-like helical
 IPR015151  Beta-adaptin appendage, C-terminal subdomain
 IPR016024  Armadillo-type fold
 IPR016342  AP-1/2/4 complex subunit beta
 IPR026739  AP complex subunit beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019898 extrinsic component of membrane IEA
 cellular_componentGO:0030117 membrane coat IEA
 cellular_componentGO:0030124 AP-4 adaptor complex IEA
 cellular_componentGO:0030131 clathrin adaptor complex IEA
 molecular_functionGO:0030276 clathrin binding IEA


Pathways (from Reactome)
Pathway description
Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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