ENSG00000134262


Homo sapiens

Features
Gene ID: ENSG00000134262
  
Biological name :AP4B1
  
Synonyms : adaptor related protein complex 4 beta 1 subunit / AP4B1 / Q9Y6B7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p13.2
Gene start: 113894748
Gene end: 113905201
  
Corresponding Affymetrix probe sets: 231714_s_at (Human Genome U133 Plus 2.0 Array)   231962_at (Human Genome U133 Plus 2.0 Array)   236221_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000256658
Ensembl peptide - ENSP00000358580
Ensembl peptide - ENSP00000358577
Ensembl peptide - ENSP00000393622
Ensembl peptide - ENSP00000358584
Ensembl peptide - ENSP00000358582
NCBI entrez gene - 10717     See in Manteia.
OMIM - 607245
RefSeq - XM_017000093
RefSeq - NM_006594
RefSeq - XM_011540523
RefSeq - XM_011540524
RefSeq - XM_011540525
RefSeq - XM_011540528
RefSeq - XM_017000088
RefSeq - XM_017000089
RefSeq - XM_017000090
RefSeq - XM_017000091
RefSeq - XM_017000092
RefSeq - NM_001253852
RefSeq - NM_001253853
RefSeq - NM_001308312
RefSeq Peptide - NP_001240782
RefSeq Peptide - NP_001295241
RefSeq Peptide - NP_006585
RefSeq Peptide - NP_001240781
swissprot - A0A024R0D2
swissprot - B1ALD3
swissprot - Q9Y6B7
swissprot - B1ALD2
swissprot - B1ALD1
swissprot - B1ALD0
Ensembl - ENSG00000134262
  
Related genetic diseases (OMIM): 614066 - Spastic paraplegia 47, autosomal recessive, 614066
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ap4b1ENSDARG00000013726Danio rerio
 AP4B1ENSGALG00000035295Gallus gallus
 Ap4b1ENSMUSG00000032952Mus musculus
 Gm43064ENSMUSG00000105053Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AP2B1 / P63010 / adaptor related protein complex 2 beta 1 subunitENSG0000000612529
AP1B1 / Q10567 / adaptor related protein complex 1 beta 1 subunitENSG0000010028029


Protein motifs (from Interpro)
Interpro ID Name
 IPR002553  Clathrin/coatomer adaptor, adaptin-like, N-terminal
 IPR011989  Armadillo-like helical
 IPR015151  Beta-adaptin appendage, C-terminal subdomain
 IPR016024  Armadillo-type fold
 IPR016342  AP-1/2/4 complex subunit beta
 IPR026739  AP complex subunit beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006605 protein targeting IC
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0008104 protein localization IC
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019898 extrinsic component of membrane IDA
 cellular_componentGO:0030117 membrane coat IEA
 cellular_componentGO:0030124 AP-4 adaptor complex IDA
 cellular_componentGO:0030131 clathrin adaptor complex IEA
 cellular_componentGO:0031904 endosome lumen TAS
 cellular_componentGO:0032588 trans-Golgi network membrane TAS
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030276 clathrin binding IEA


Pathways (from Reactome)
Pathway description
Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000322 Short philtrum 
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 HP:0000341 Narrow forehead "An abnormally reduced side-to-side width of the forehead." [HPO:curators]
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 HP:0000414 Bulbous nose 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000750 Impaired language development 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002515 Waddling gait 
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 HP:0002518 Periventricular white matter changes 
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 HP:0002816 Genu recurvatum 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0003677 Slow progression 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0008807 Acetabular dysplasia 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000081014 AP4E1 / Q9UPM8 / adaptor related protein complex 4 epsilon 1 subunit  / complex
 ENSG00000221838 AP4M1 / O00189 / adaptor related protein complex 4 mu 1 subunit  / complex
 ENSG00000100478 AP4S1 / Q9Y587 / adaptor related protein complex 4 sigma 1 subunit  / complex
 ENSG00000142192 APP / P05067 / amyloid beta precursor protein  / reaction / complex






 

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