ENSGALG00000015387


Gallus gallus

Features
Gene ID: ENSGALG00000015387
  
Biological name :ATG5
  
Synonyms : ATG5 / autophagy related 5
  
Possible biological names infered from orthology : Autophagy protein 5 / Q99J83 / Q9H1Y0
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 68405534
Gene end: 68477842
  
Corresponding Affymetrix probe sets: GgaAffx.13125.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050539
Ensembl peptide - ENSGALP00000056638
Ensembl peptide - ENSGALP00000053246
Ensembl peptide - ENSGALP00000024777
Ensembl peptide - ENSGALP00000042749
NCBI entrez gene - 421784     See in Manteia.
RefSeq - XM_015284523
RefSeq - XM_015284517
RefSeq - XM_015284518
RefSeq - XM_015284519
RefSeq - XM_015284520
RefSeq - XM_015284521
RefSeq - XM_015284522
RefSeq - NM_001006409
RefSeq - XM_015284516
RefSeq Peptide - NP_001006409
swissprot - A0A1D5PUN4
swissprot - A0A1D5PK91
swissprot - A0A1D5PCP9
swissprot - Q5ZHW2
swissprot - R4GKP3
Ensembl - ENSGALG00000015387
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atg5ENSDARG00000023396Danio rerio
 ATG5ENSG00000057663Homo sapiens
 Atg5ENSMUSG00000038160Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007239  Autophagy-related protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IEA
 biological_processGO:0000422 autophagy of mitochondrion IEA
 biological_processGO:0001974 blood vessel remodeling IEA
 biological_processGO:0002739 regulation of cytokine secretion involved in immune response IEA
 biological_processGO:0006501 C-terminal protein lipidation IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0006995 cellular response to nitrogen starvation IBA
 biological_processGO:0009267 cellular response to starvation IEA
 biological_processGO:0009620 response to fungus IEA
 biological_processGO:0016236 macroautophagy IEA
 biological_processGO:0019725 cellular homeostasis IEA
 biological_processGO:0019883 antigen processing and presentation of endogenous antigen IEA
 biological_processGO:0031397 negative regulation of protein ubiquitination IEA
 biological_processGO:0035973 aggrephagy IEA
 biological_processGO:0039689 negative stranded viral RNA replication IEA
 biological_processGO:0042311 vasodilation IEA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0043687 post-translational protein modification IEA
 biological_processGO:0044804 autophagy of nucleus IBA
 biological_processGO:0045060 negative thymic T cell selection IEA
 biological_processGO:0048840 otolith development IEA
 biological_processGO:0050765 negative regulation of phagocytosis IEA
 biological_processGO:0051279 regulation of release of sequestered calcium ion into cytosol IEA
 biological_processGO:0055015 ventricular cardiac muscle cell development IEA
 biological_processGO:0060047 heart contraction IEA
 biological_processGO:0060548 negative regulation of cell death IEA
 biological_processGO:0061739 protein lipidation involved in autophagosome assembly IEA
 biological_processGO:0070257 positive regulation of mucus secretion IEA
 biological_processGO:0071500 cellular response to nitrosative stress IEA
 biological_processGO:0075044 autophagy of host cells involved in interaction with symbiont IEA
 biological_processGO:1902017 regulation of cilium assembly IEA
 biological_processGO:2000377 regulation of reactive oxygen species metabolic process IEA
 biological_processGO:2000378 negative regulation of reactive oxygen species metabolic process IEA
 biological_processGO:2000619 negative regulation of histone H4-K16 acetylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005776 autophagosome IEA
 cellular_componentGO:0005930 axoneme IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0034045 phagophore assembly site membrane IEA
 cellular_componentGO:0034274 Atg12-Atg5-Atg16 complex IBA
 cellular_componentGO:0044233 ER-mitochondrion membrane contact site IEA
 molecular_functionGO:0019776 Atg8 ligase activity IBA


Pathways (from Reactome)
Pathway description
Macroautophagy
Pink/Parkin Mediated Mitophagy
Receptor Mediated Mitophagy
Negative Regulation of MDA5 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000015387 ATG5 / autophagy related 5 / Q99J83* / Q9H1Y0* / Autophagy protein 5 *  / complex / reaction






 

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contact: otassy@igbmc.fr