ENSGALG00000016514


Gallus gallus

Features
Gene ID: ENSGALG00000016514
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 104901787
Gene end: 104905115
  
Corresponding Affymetrix probe sets: Gga.7461.1.S1_at (Chicken Array)   Gga.7461.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026597
NCBI entrez gene - 421988     See in Manteia.
RefSeq - XM_004935815
RefSeq - XM_004935816
RefSeq - XM_419997
swissprot - F1NUB7
Ensembl - ENSGALG00000016514
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-278j3.3ENSDARG00000020284Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF19A / ring finger protein 19A, RBR E3 ubiquitin protein ligase / P50636* / Q9NV58* / E3 ubiquitin-protein ligase RNF19A *ENSGALG0000003877243
RNF19B / ring finger protein 19B / A2A7Q9* / Q6ZMZ0* / E3 ubiquitin-protein ligase RNF19B *ENSGALG0000003971628
RNF144B / ring finger protein 144B / Q7Z419* / Q8BKD6* / E3 ubiquitin-protein ligase RNF144B *ENSGALG0000001268313
RNF144A / ring finger protein 144A / P50876* / Q925F3* / E3 ubiquitin-protein ligase RNF144A *ENSGALG0000002870913
RNF14 / ring finger protein 14 / Q9JI90* / Q9UBS8*ENSGALG0000004308512


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR002867  IBR domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031127  E3 ubiquitin ligase RBR family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr