ENSGALG00000038772


Gallus gallus

Features
Gene ID: ENSGALG00000038772
  
Biological name :RNF19A
  
Synonyms : ring finger protein 19A, RBR E3 ubiquitin protein ligase / RNF19A
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF19A / P50636 / Q9NV58
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 129040782
Gene end: 129061227
  
Corresponding Affymetrix probe sets: Gga.20011.2.S1_at (Chicken Array)   Gga.20011.2.S1_s_at (Chicken Array)   GgaAffx.24835.1.S1_at (Chicken Array)   GgaAffx.24835.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046642
Ensembl peptide - ENSGALP00000047547
NCBI entrez gene - 420251     See in Manteia.
RefSeq - XM_418362
RefSeq - XM_015282970
RefSeq - XM_015282971
RefSeq - XM_015282968
RefSeq - XM_015282969
swissprot - A0A1D5P4D9
swissprot - A0A1D5P1V0
Ensembl - ENSGALG00000038772
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf19aENSDARG00000012040Danio rerio
 Q9NV58ENSG00000034677Homo sapiens
 P50636ENSMUSG00000022280Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF19B / ring finger protein 19B / A2A7Q9* / Q6ZMZ0* / E3 ubiquitin-protein ligase RNF19B *ENSGALG0000003971636
ENSGALG0000001651430
RNF144A / ring finger protein 144A / P50876* / Q925F3* / E3 ubiquitin-protein ligase RNF144A *ENSGALG0000002870911
RNF144B / ring finger protein 144B / Q7Z419* / Q8BKD6* / E3 ubiquitin-protein ligase RNF144B *ENSGALG0000001268311
RNF14 / ring finger protein 14 / Q9JI90* / Q9UBS8*ENSGALG0000004308510


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR002867  IBR domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031127  E3 ubiquitin ligase RBR family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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