ENSGALG00000012683


Gallus gallus

Features
Gene ID: ENSGALG00000012683
  
Biological name :RNF144B
  
Synonyms : ring finger protein 144B / RNF144B
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF144B / Q7Z419 / Q8BKD6
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 60441862
Gene end: 60473502
  
Corresponding Affymetrix probe sets: GgaAffx.8033.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020664
NCBI entrez gene - 420827     See in Manteia.
RefSeq - XM_004939623
RefSeq - XM_418918
RefSeq - XM_004939624
RefSeq - XM_015275952
swissprot - E1BRG4
Ensembl - ENSGALG00000012683
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf144bENSDARG00000024940Danio rerio
 Q7Z419ENSG00000137393Homo sapiens
 Q8BKD6ENSMUSG00000038068Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF144A / ring finger protein 144A / P50876* / Q925F3* / E3 ubiquitin-protein ligase RNF144A *ENSGALG0000002870953
RNF19A / ring finger protein 19A, RBR E3 ubiquitin protein ligase / P50636* / Q9NV58* / E3 ubiquitin-protein ligase RNF19A *ENSGALG0000003877229
ENSGALG0000001651424
RNF14 / ring finger protein 14 / Q9JI90* / Q9UBS8*ENSGALG0000004308521
RNF19B / ring finger protein 19B / A2A7Q9* / Q6ZMZ0* / E3 ubiquitin-protein ligase RNF19B *ENSGALG0000003971614


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR002867  IBR domain
 IPR017907  Zinc finger, RING-type, conserved site
 IPR031127  E3 ubiquitin ligase RBR family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031966 mitochondrial membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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