ENSGALG00000028709


Gallus gallus

Features
Gene ID: ENSGALG00000028709
  
Biological name :RNF144A
  
Synonyms : ring finger protein 144A / RNF144A
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF144A / P50876 / Q925F3
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 95415555
Gene end: 95474483
  
Corresponding Affymetrix probe sets: GgaAffx.10499.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042877
NCBI entrez gene - 421922     See in Manteia.
RefSeq - XM_015284946
RefSeq - XM_419938
swissprot - R4GL10
Ensembl - ENSGALG00000028709
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5RFV4ENSDARG00000020600Danio rerio
 rnf144abENSDARG00000042557Danio rerio
 P50876ENSG00000151692Homo sapiens
 Q925F3ENSMUSG00000020642Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF144B / ring finger protein 144B / Q7Z419* / Q8BKD6* / E3 ubiquitin-protein ligase RNF144B *ENSGALG0000001268355
RNF19A / ring finger protein 19A, RBR E3 ubiquitin protein ligase / P50636* / Q9NV58* / E3 ubiquitin-protein ligase RNF19A *ENSGALG0000003877229
ENSGALG0000001651425
RNF14 / ring finger protein 14 / Q9JI90* / Q9UBS8*ENSGALG0000004308522
RNF19B / ring finger protein 19B / A2A7Q9* / Q6ZMZ0* / E3 ubiquitin-protein ligase RNF19B *ENSGALG0000003971613


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR002867  IBR domain
 IPR017907  Zinc finger, RING-type, conserved site
 IPR031127  E3 ubiquitin ligase RBR family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / complex
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / complex






 

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