ENSDARG00000020600


Danio rerio

Features
Gene ID: ENSDARG00000020600
  
Biological name :rnf144aa
  
Synonyms : Q5RFV4 / ring finger protein 144aa / rnf144aa
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF144A / P50876 / Q925F3 / ring finger protein 144A / RNF144A
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 35285876
Gene end: 35352690
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000017882
NCBI entrez gene - 570968     See in Manteia.
swissprot - Q5RFV4
ZFIN ID - ZDB-GENE-041001-88
Ensembl - ENSDARG00000020600
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF144AENSGALG00000028709Gallus gallus
 P50876ENSG00000151692Homo sapiens
 Q925F3ENSMUSG00000020642Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf144ab / ring finger protein 144ab / P50876* / Q925F3* / RNF144A* / ring finger protein 144A* / E3 ubiquitin-protein ligase RNF144A *ENSDARG0000004255782
rnf144b / ring finger protein 144B / Q7Z419*ENSDARG0000002494045
rnf19a / ring finger protein 19A, RBR E3 ubiquitin protein ligase / Q9NV58*ENSDARG0000001204029
rnf19b / ring finger protein 19B / A2A7Q9* / Q6ZMZ0* / E3 ubiquitin-protein ligase RNF19B *ENSDARG0000006092626
si:ch211-278j3.3ENSDARG0000002028425
RNF14 (1 of many) / ring finger protein 14 / RNF14* / Q9UBS8*ENSDARG0000009172723
zmp:0000000524 / RNF14 (1 of many) / RNF14* / Q9UBS8* / ring finger protein 14*ENSDARG0000007868322
rnf14 / ring finger protein 14 / Q9UBS8*ENSDARG0000004390521
RNF14 (1 of many) / ring finger protein 14 / RNF14* / Q9UBS8*ENSDARG0000010463113


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR002867  IBR domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR031127  E3 ubiquitin ligase RBR family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005794 Golgi apparatus IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
E3 ubiquitin ligases ubiquitinate target proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000075083 prkdc / protein kinase, DNA-activated, catalytic polypeptide / P78527* / P97313* / DNA-dependent protein kinase catalytic subunit *  / complex / reaction






 

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