ENSG00000034677


Homo sapiens

Features
Gene ID: ENSG00000034677
  
Biological name :RNF19A
  
Synonyms : Q9NV58 / ring finger protein 19A, RBR E3 ubiquitin protein ligase / RNF19A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q22.2
Gene start: 100257060
Gene end: 100336218
  
Corresponding Affymetrix probe sets: 220483_s_at (Human Genome U133 Plus 2.0 Array)   223085_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000397305
Ensembl peptide - ENSP00000428968
Ensembl peptide - ENSP00000431077
Ensembl peptide - ENSP00000430553
Ensembl peptide - ENSP00000429841
Ensembl peptide - ENSP00000429549
Ensembl peptide - ENSP00000429161
Ensembl peptide - ENSP00000342667
NCBI entrez gene - 25897     See in Manteia.
RefSeq - XM_017013305
RefSeq - NM_001280539
RefSeq - NM_001353838
RefSeq - NM_015435
RefSeq - NM_183419
RefSeq - XM_005250853
RefSeq - XM_011516956
RefSeq - XM_017013302
RefSeq - XM_017013303
RefSeq - XM_017013304
RefSeq Peptide - NP_001340766
RefSeq Peptide - NP_056250
RefSeq Peptide - NP_904355
RefSeq Peptide - NP_001340767
RefSeq Peptide - NP_001267468
swissprot - A3KCU8
swissprot - Q9NV58
swissprot - A0A0C4DGD6
swissprot - E7ETB2
swissprot - E7EQV8
swissprot - E7EQ63
swissprot - E5RJH6
Ensembl - ENSG00000034677
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf19aENSDARG00000012040Danio rerio
 RNF19AENSGALG00000038772Gallus gallus
 P50636ENSMUSG00000022280Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6ZMZ0 / RNF19B / ring finger protein 19BENSG0000011651449
Q7Z419 / RNF144B / ring finger protein 144BENSG0000013739311
P50876 / RNF144A / ring finger protein 144AENSG0000015169210
RNF14 / Q9UBS8 / ring finger protein 14ENSG0000001356110


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR002867  IBR domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031127  E3 ubiquitin ligase RBR family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0000226 microtubule cytoskeleton organization TAS
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005813 centrosome TAS
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008134 transcription factor binding TAS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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