ENSMUSG00000022280


Mus musculus

Features
Gene ID: ENSMUSG00000022280
  
Biological name :Rnf19a
  
Synonyms : E3 ubiquitin-protein ligase RNF19A / P50636 / Rnf19a
  
Possible biological names infered from orthology : Q9NV58 / ring finger protein 19A, RBR E3 ubiquitin protein ligase
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: B3.1
Gene start: 36239933
Gene end: 36283147
  
Corresponding Affymetrix probe sets: 10428157 (MoGene1.0st)   1417508_at (Mouse Genome 430 2.0 Array)   1417509_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000022890
Ensembl peptide - ENSMUSP00000154617
NCBI entrez gene - 30945     See in Manteia.
MGI - MGI:1353623
RefSeq - XM_006520081
RefSeq - NM_013923
RefSeq Peptide - NP_038951
RefSeq Peptide - NP_001344560
swissprot - P50636
Ensembl - ENSMUSG00000022280
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf19aENSDARG00000012040Danio rerio
 RNF19AENSGALG00000038772Gallus gallus
 Q9NV58ENSG00000034677Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A2A7Q9 / Rnf19b / E3 ubiquitin-protein ligase RNF19B / Q6ZMZ0* / ring finger protein 19B*ENSMUSG0000002879349
Rnf14 / Q9JI90 / ring finger protein 14 / Q9UBS8*ENSMUSG0000006045010
Q8BKD6 / Rnf144b / E3 ubiquitin-protein ligase RNF144B / Q7Z419* / ring finger protein 144B*ENSMUSG0000003806810
Q925F3 / Rnf144a / E3 ubiquitin-protein ligase RNF144A / P50876* / ring finger protein 144A*ENSMUSG0000002064210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR002867  IBR domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031127  E3 ubiquitin ligase RBR family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005813 centrosome IBA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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