ENSGALG00000026278


Gallus gallus

Features
Gene ID: ENSGALG00000026278
  
Biological name :RAB6B
  
Synonyms : RAB6B / RAB6B, member RAS oncogene family
  
Possible biological names infered from orthology : P61294 / Q9NRW1
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 1260361
Gene end: 1273886
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000042154
NCBI entrez gene - 101751235     See in Manteia.
RefSeq - XM_015278353
RefSeq - XM_015278354
swissprot - R4GJ51
Ensembl - ENSGALG00000026278
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab41ENSDARG00000029885Danio rerio
 RAB6BENSG00000154917Homo sapiens
 Rab6bENSMUSG00000032549Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB6A / Q1KME6 / Ras-related protein Rab-6A / RAB6D* / RAB6C* / Q9H0N0* / P35279* / P20340* / RAB6A, member RAS oncogene family* / RAB6D, member RAS oncogene family* / RAB6C, member RAS on...ENSGALG0000001732091
RAB36 / RAB36, member RAS oncogene family / O95755* / Q8CAM5* / Mus musculus RAB36, member RAS onco family (Rab36), transcript variant 1, mRNA.*ENSGALG0000000671035
RAB34 / RAB34, member RAS oncogene family / P0DI83* / Q9BZG1*ENSGALG0000002631533


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER IBA
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport IBA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0031489 myosin V binding IEA


Pathways (from Reactome)
Pathway description
COPI-independent Golgi-to-ER retrograde traffic
Retrograde transport at the Trans-Golgi-Network
TBC/RABGAPs
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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