ENSGALG00000029653


Gallus gallus

Features
Gene ID: ENSGALG00000029653
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 2698657
Gene end: 2739282
  
Corresponding Affymetrix probe sets: GgaAffx.896.1.S1_at (Chicken Array)   GgaAffx.896.2.S1_s_at (Chicken Array)   GgaAffx.922.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044673
Ensembl peptide - ENSGALP00000052819
NCBI entrez gene - 419599     See in Manteia.
RefSeq - XM_015297748
RefSeq - XM_015297746
RefSeq - XM_015297747
RefSeq - XM_015297742
RefSeq - XM_015297744
RefSeq - XM_015297745
swissprot - A0A1D5PJ28
swissprot - A0A1D5NWD4
Ensembl - ENSGALG00000029653
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 l3mbtl1bENSDARG00000074346Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
L3MBTL1 / L3MBTL1, histone methyl-lysine binding protein / A2A5N8* / Q9Y468* / Lethal(3)malignant brain tumor-like protein 1 *ENSGALG0000003071046
L3MBTL3 / L3MBTL3, histone methyl-lysine binding protein / Q8BLB7* / Q96JM7* / Mus musculus L3MBTL3 histone methyl-lysine binding protein (L3mbtl3), transcript variant 3, mRNA.*ENSGALG0000003403025
SFMBT2 / Scm like with four mbt domains 2 / Q5VUG0*ENSGALG0000000927923
SFMBT1 / Scm like with four mbt domains 1 / Q9JMD1* / Q9UHJ3* / Scm-like with four MBT domains protein 1 *ENSGALG0000000175322
L3MBTL2 / L3MBTL2, polycomb repressive complex 1 subunit / P59178* / Q969R5* / Lethal(3)malignant brain tumor-like protein 2 *ENSGALG0000001197620
MBTD1 / mbt domain containing 1 / Q05BQ5* / Q6P5G3* / MBT domain-containing protein 1 *ENSGALG0000000295420
SCMH1 / Scm polycomb group protein homolog 1 / Q8K214* / Q96GD3* / Polycomb protein SCMH1 *ENSGALG0000000067216
SCML2 / Scm polycomb group protein like 2 / Q9UQR0*ENSGALG0000001653714
SCML4 / Scm polycomb group protein like 4 / Q80VG1* / Q8N228*ENSGALG000000153099


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR002515  Zinc finger, C2HC-type
 IPR004092  Mbt repeat
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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