Manteia

ENSGALG00000011976

Gallus gallus

Features

Gene ID:	ENSGALG00000011976

Biological name :	L3MBTL2

Synonyms :	L3MBTL2 / L3MBTL2, polycomb repressive complex 1 subunit

Possible biological names infered from orthology :	Lethal(3)malignant brain tumor-like protein 2 / P59178 / Q969R5

Species:	Gallus gallus

Chr. number:	1
Strand:	-1
Band:
Gene start:	49793237
Gene end:	49807832

Corresponding Affymetrix probe sets:	Gga.16661.1.S1_s_at (Chicken Array) Gga.19860.1.S1_at (Chicken Array)

Cross references:	Ensembl peptide - ENSGALP00000019511 NCBI entrez gene - 417999 See in Manteia. RefSeq - NM_001006238 RefSeq - XM_015285162 RefSeq Peptide - NP_001006238 swissprot - Q5ZLC2 Ensembl - ENSGALG00000011976

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
MBTD1 / mbt domain containing 1 / Q05BQ5* / Q6P5G3* / MBT domain-containing protein 1 *	ENSGALG00000002954	49
SFMBT1 / Scm like with four mbt domains 1 / Q9JMD1* / Q9UHJ3* / Scm-like with four MBT domains protein 1 *	ENSGALG00000001753	25
SFMBT2 / Scm like with four mbt domains 2 / Q5VUG0*	ENSGALG00000009279	24
L3MBTL1 / L3MBTL1, histone methyl-lysine binding protein / A2A5N8* / Q9Y468* / Lethal(3)malignant brain tumor-like protein 1 *	ENSGALG00000030710	22
	ENSGALG00000029653	19
SCMH1 / Scm polycomb group protein homolog 1 / Q8K214* / Q96GD3* / Polycomb protein SCMH1 *	ENSGALG00000000672	13
L3MBTL3 / L3MBTL3, histone methyl-lysine binding protein / Q8BLB7* / Q96JM7* / Mus musculus L3MBTL3 histone methyl-lysine binding protein (L3mbtl3), transcript variant 3, mRNA.*	ENSGALG00000034030	11
SCML2 / Scm polycomb group protein like 2 / Q9UQR0*	ENSGALG00000016537	8
SCML4 / Scm polycomb group protein like 4 / Q80VG1* / Q8N228*	ENSGALG00000015309	3

Protein motifs (from Interpro)

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006355	regulation of transcription, DNA-templated	IEA
cellular_component	GO:0005634	nucleus	IEA
molecular_function	GO:0008270	zinc ion binding	IEA
molecular_function	GO:0035064	methylated histone binding	IEA
molecular_function	GO:0042393	histone binding	IEA

Pathways (from Reactome)

Pathway description

SUMOylation of chromatin organization proteins

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSGALG00000008230	PCGF6 / polycomb group ring finger 6 / Q99NA9* / Q9BYE7* / Polycomb group RING finger protein 6 *	/ complex
ENSGALG00000037219	RNF2 / ring finger protein 2 / Q99496* / Q9CQJ4* / E3 ubiquitin-protein ligase RING2 *	/ complex
ENSGALG00000006428	UBE2I / P63283 / SUMO-conjugating enzyme UBC9 / P63280* / P63279* / ubiquitin conjugating enzyme E2 I*	/ reaction
ENSGALG00000009540	YAF2 / YY1 associated factor 2 / Q8IY57* / Q99LW6*	/ complex
ENSGALG00000007971	SUMO2 / Q5ZJM9 / Small ubiquitin-related modifier 2 / SUMO4* / Q6EEV6* / P61957* / P61956* / small ubiquitin-like modifier 2* / small ubiquitin-like modifier 4*	/ reaction
ENSGALG00000016454	E2F6 / E2F transcription factor 6 / O54917* / O75461* / Transcription factor E2F6 *	/ complex / reaction
ENSGALG00000011038	CBX3 / Q13185* / chromobox 3* / chromobox protein homolog 3 *	/ complex / reaction
ENSGALG00000016823	TFDP1* / TFDP3* / Q5H9I0* / Q08639* / Q14186* / transcription factor Dp-1* / transcription factor Dp family member 3*	/ complex / reaction

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr