ENSGALG00000016537


Gallus gallus

Features
Gene ID: ENSGALG00000016537
  
Biological name :SCML2
  
Synonyms : SCML2 / Scm polycomb group protein like 2
  
Possible biological names infered from orthology : Q9UQR0
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 120694801
Gene end: 120730607
  
Corresponding Affymetrix probe sets: Gga.10376.1.S1_s_at (Chicken Array)   GgaAffx.24994.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026636
NCBI entrez gene - 418613     See in Manteia.
RefSeq - XM_004934692
RefSeq - XM_004934693
RefSeq - XM_015272956
RefSeq - XM_015272978
RefSeq - XM_015272979
RefSeq - XM_015272981
RefSeq - XM_004934691
swissprot - E1BTW0
Ensembl - ENSGALG00000016537
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scml2ENSDARG00000012949Danio rerio
 SCML2ENSG00000102098Homo sapiens
 Scml2ENSMUSG00000000037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCMH1 / Scm polycomb group protein homolog 1 / Q8K214* / Q96GD3* / Polycomb protein SCMH1 *ENSGALG0000000067241
SCML4 / Scm polycomb group protein like 4 / Q80VG1* / Q8N228*ENSGALG0000001530927
SFMBT1 / Scm like with four mbt domains 1 / Q9JMD1* / Q9UHJ3* / Scm-like with four MBT domains protein 1 *ENSGALG0000000175323
SFMBT2 / Scm like with four mbt domains 2 / Q5VUG0*ENSGALG0000000927921
L3MBTL1 / L3MBTL1, histone methyl-lysine binding protein / A2A5N8* / Q9Y468* / Lethal(3)malignant brain tumor-like protein 1 *ENSGALG0000003071016
ENSGALG0000002965315
L3MBTL2 / L3MBTL2, polycomb repressive complex 1 subunit / P59178* / Q969R5* / Lethal(3)malignant brain tumor-like protein 2 *ENSGALG000000119769
MBTD1 / mbt domain containing 1 / Q05BQ5* / Q6P5G3* / MBT domain-containing protein 1 *ENSGALG000000029549
L3MBTL3 / L3MBTL3, histone methyl-lysine binding protein / Q8BLB7* / Q96JM7* / Mus musculus L3MBTL3 histone methyl-lysine binding protein (L3mbtl3), transcript variant 3, mRNA.*ENSGALG000000340305


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR004092  Mbt repeat
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021987  SLED domain
 IPR033763  Polycomb group protein, RNA binding region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0031519 PcG protein complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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