ENSG00000102098


Homo sapiens

Features
Gene ID: ENSG00000102098
  
Biological name :SCML2
  
Synonyms : Q9UQR0 / SCML2 / Scm polycomb group protein like 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: p22.13
Gene start: 18239314
Gene end: 18354727
  
Corresponding Affymetrix probe sets: 206147_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000251900
Ensembl peptide - ENSP00000381126
Ensembl peptide - ENSP00000407315
NCBI entrez gene - 10389     See in Manteia.
OMIM - 300208
RefSeq - XM_017029221
RefSeq - NM_006089
RefSeq - XM_006724458
RefSeq - XM_017029219
RefSeq - XM_017029220
RefSeq Peptide - NP_006080
swissprot - Q9UQR0
swissprot - H0Y6S1
Ensembl - ENSG00000102098
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scml2ENSDARG00000012949Danio rerio
 SCML2ENSGALG00000016537Gallus gallus
 Scml2ENSMUSG00000000037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCMH1 / Q96GD3 / Scm polycomb group protein homolog 1ENSG0000001080345
Q9UHJ3 / SFMBT1 / Scm like with four mbt domains 1ENSG0000016393524
Q5VUG0 / SFMBT2 / Scm like with four mbt domains 2ENSG0000019887923
SCML4 / Q8N228 / Scm polycomb group protein like 4ENSG0000014628522
Q8NA19 / L3MBTL4 / L3MBTL4, histone methyl-lysine binding proteinENSG0000015465521
Q96JM7 / L3MBTL3 / L3MBTL3, histone methyl-lysine binding proteinENSG0000019894519
Q9Y468 / L3MBTL1 / L3MBTL1, histone methyl-lysine binding proteinENSG0000018551318
Q969R5 / L3MBTL2 / L3MBTL2, polycomb repressive complex 1 subunitENSG0000010039514
MBTD1 / Q05BQ5 / mbt domain containing 1ENSG0000001125814


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR004092  Mbt repeat
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021987  SLED domain
 IPR033763  Polycomb group protein, RNA binding region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0009653 anatomical structure morphogenesis TAS
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0031519 PcG protein complex IDA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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