ENSG00000198879


Homo sapiens

Features
Gene ID: ENSG00000198879
  
Biological name :SFMBT2
  
Synonyms : Q5VUG0 / Scm like with four mbt domains 2 / SFMBT2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: p14
Gene start: 7158624
Gene end: 7411486
  
Corresponding Affymetrix probe sets: 227210_at (Human Genome U133 Plus 2.0 Array)   232938_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000355109
Ensembl peptide - ENSP00000369033
Ensembl peptide - ENSP00000369035
Ensembl peptide - ENSP00000380353
NCBI entrez gene - 57713     See in Manteia.
OMIM - 615392
RefSeq - XM_017016466
RefSeq - NM_001018039
RefSeq - NM_001029880
RefSeq - XM_005252551
RefSeq - XM_006717490
RefSeq - XM_011519611
RefSeq Peptide - NP_001018049
RefSeq Peptide - NP_001025051
swissprot - Q5VUG0
swissprot - Q5T980
swissprot - Q5T981
Ensembl - ENSG00000198879
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sfmbt2ENSDARG00000045519Danio rerio
 SFMBT2ENSGALG00000009279Gallus gallus
 Sfmbt2ENSMUSG00000061186Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UHJ3 / SFMBT1 / Scm like with four mbt domains 1ENSG0000016393554
Q969R5 / L3MBTL2 / L3MBTL2, polycomb repressive complex 1 subunitENSG0000010039521
SCML2 / Q9UQR0 / Scm polycomb group protein like 2ENSG0000010209818
MBTD1 / Q05BQ5 / mbt domain containing 1ENSG0000001125818
Q9Y468 / L3MBTL1 / L3MBTL1, histone methyl-lysine binding proteinENSG0000018551318
Q96JM7 / L3MBTL3 / L3MBTL3, histone methyl-lysine binding proteinENSG0000019894517
Q8NA19 / L3MBTL4 / L3MBTL4, histone methyl-lysine binding proteinENSG0000015465517
SCMH1 / Q96GD3 / Scm polycomb group protein homolog 1ENSG0000001080317
SCML4 / Q8N228 / Scm polycomb group protein like 4ENSG0000014628511


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR004092  Mbt repeat
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021987  SLED domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010629 negative regulation of gene expression IDA
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0016235 aggresome IDA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042393 histone binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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