ENSDARG00000045519


Danio rerio

Features
Gene ID: ENSDARG00000045519
  
Biological name :sfmbt2
  
Synonyms : Scm like with four mbt domains 2 / sfmbt2
  
Possible biological names infered from orthology : Q5VUG0
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 25300910
Gene end: 25359034
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114062
Ensembl peptide - ENSDARP00000143791
swissprot - A0A286Y9G2
swissprot - F1QXQ3
ZFIN ID - ZDB-GENE-041210-196
Ensembl - ENSDARG00000045519
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SFMBT2ENSGALG00000009279Gallus gallus
 Q5VUG0ENSG00000198879Homo sapiens
 Sfmbt2ENSMUSG00000061186Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SFMBT1 / Scm like with four mbt domains 1 / Q9UHJ3*ENSDARG0000010983049
scml2 / Scm polycomb group protein like 2 / Q9UQR0*ENSDARG0000001294918
l3mbtl2 / l(3)mbt-like 2 (Drosophila) / P59178* / Q969R5* / L3MBTL2, polycomb repressive complex 1 subunit* / Lethal(3)malignant brain tumor-like protein 2 *ENSDARG0000005607917
mbtd1 / mbt domain containing 1 / Q05BQ5* / Q6P5G3* / MBT domain-containing protein 1 *ENSDARG0000006086817
l3mbtl1a / l(3)mbt-like 1a (Drosophila) / A2A5N8* / Q9Y468* / L3MBTL1* / Lethal(3)malignant brain tumor-like protein 1 * / L3MBTL1, histone methyl-lysine binding protein*ENSDARG0000001482816
l3mbtl1b / l(3)mbt-like 1b (Drosophila)ENSDARG0000007434616
l3mbtl3 / l(3)mbt-like 3 (Drosophila) / Q8BLB7* / Q96JM7* / L3MBTL3, histone methyl-lysine binding protein* / Mus musculus L3MBTL3 histone methyl-lysine binding protein (L3mbtl3), transcrip...ENSDARG0000002598316
scml4 / Scm polycomb group protein like 4 / Q80VG1* / Q8N228*ENSDARG000000172669
scmh1 / Scm polycomb group protein homolog 1 / Q8K214* / Q96GD3* / Polycomb protein SCMH1 *ENSDARG000001043115


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR004092  Mbt repeat
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021987  SLED domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0042393 histone binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr