ENSGALG00000009279


Gallus gallus

Features
Gene ID: ENSGALG00000009279
  
Biological name :SFMBT2
  
Synonyms : Scm like with four mbt domains 2 / SFMBT2
  
Possible biological names infered from orthology : Q5VUG0
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 3929632
Gene end: 4025430
  
Corresponding Affymetrix probe sets: Gga.10786.1.S1_at (Chicken Array)   GgaAffx.5846.1.S1_s_at (Chicken Array)   GgaAffx.5846.2.S1_s_at (Chicken Array)   GgaAffx.5846.4.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047620
Ensembl peptide - ENSGALP00000015080
NCBI entrez gene - 425485     See in Manteia.
RefSeq - XM_015290517
RefSeq - XM_015290460
swissprot - F1P4S5
swissprot - A0A1D5P4K9
Ensembl - ENSGALG00000009279
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sfmbt2ENSDARG00000045519Danio rerio
 Q5VUG0ENSG00000198879Homo sapiens
 Sfmbt2ENSMUSG00000061186Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SFMBT1 / Scm like with four mbt domains 1 / Q9JMD1* / Q9UHJ3* / Scm-like with four MBT domains protein 1 *ENSGALG0000000175357
L3MBTL2 / L3MBTL2, polycomb repressive complex 1 subunit / P59178* / Q969R5* / Lethal(3)malignant brain tumor-like protein 2 *ENSGALG0000001197620
L3MBTL1 / L3MBTL1, histone methyl-lysine binding protein / A2A5N8* / Q9Y468* / Lethal(3)malignant brain tumor-like protein 1 *ENSGALG0000003071019
MBTD1 / mbt domain containing 1 / Q05BQ5* / Q6P5G3* / MBT domain-containing protein 1 *ENSGALG0000000295418
ENSGALG0000002965317
SCMH1 / Scm polycomb group protein homolog 1 / Q8K214* / Q96GD3* / Polycomb protein SCMH1 *ENSGALG0000000067214
SCML2 / Scm polycomb group protein like 2 / Q9UQR0*ENSGALG0000001653714
SCML4 / Scm polycomb group protein like 4 / Q80VG1* / Q8N228*ENSGALG0000001530910
L3MBTL3 / L3MBTL3, histone methyl-lysine binding protein / Q8BLB7* / Q96JM7* / Mus musculus L3MBTL3 histone methyl-lysine binding protein (L3mbtl3), transcript variant 3, mRNA.*ENSGALG000000340307


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR004092  Mbt repeat
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021987  SLED domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016235 aggresome IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0042393 histone binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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