ENSG00000146285


Homo sapiens

Features
Gene ID: ENSG00000146285
  
Biological name :SCML4
  
Synonyms : Q8N228 / SCML4 / Scm polycomb group protein like 4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q21
Gene start: 107704104
Gene end: 107824317
  
Corresponding Affymetrix probe sets: 1555356_a_at (Human Genome U133 Plus 2.0 Array)   1556471_at (Human Genome U133 Plus 2.0 Array)   1556472_s_at (Human Genome U133 Plus 2.0 Array)   1563542_a_at (Human Genome U133 Plus 2.0 Array)   1569225_a_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358017
Ensembl peptide - ENSP00000395589
Ensembl peptide - ENSP00000358016
Ensembl peptide - ENSP00000404688
Ensembl peptide - ENSP00000358018
Ensembl peptide - ENSP00000358021
NCBI entrez gene - 256380     See in Manteia.
RefSeq - XM_017010687
RefSeq - XM_017010679
RefSeq - XM_017010680
RefSeq - XM_017010681
RefSeq - XM_017010682
RefSeq - XM_017010683
RefSeq - XM_017010685
RefSeq - XM_017010686
RefSeq - NM_001286408
RefSeq - NM_001286409
RefSeq - NM_198081
RefSeq - XM_011535703
RefSeq - XM_011535704
RefSeq - XM_011535706
RefSeq - XM_011535707
RefSeq - XM_011535709
RefSeq - XM_011535710
RefSeq - XM_017010677
RefSeq - XM_017010678
RefSeq Peptide - NP_001273337
RefSeq Peptide - NP_001273338
RefSeq Peptide - NP_932347
swissprot - F2Z2X1
swissprot - A0A0B4J1S9
swissprot - Q5T0T5
swissprot - Q8N228
Ensembl - ENSG00000146285
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scml4ENSDARG00000017266Danio rerio
 SCML4ENSGALG00000015309Gallus gallus
 Scml4ENSMUSG00000044770Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCMH1 / Q96GD3 / Scm polycomb group protein homolog 1ENSG0000001080346
SCML2 / Q9UQR0 / Scm polycomb group protein like 2ENSG0000010209836
Q9UHJ3 / SFMBT1 / Scm like with four mbt domains 1ENSG0000016393523
Q5VUG0 / SFMBT2 / Scm like with four mbt domains 2ENSG0000019887923
Q8NA19 / L3MBTL4 / L3MBTL4, histone methyl-lysine binding proteinENSG0000015465516
Q96JM7 / L3MBTL3 / L3MBTL3, histone methyl-lysine binding proteinENSG0000019894513
Q9Y468 / L3MBTL1 / L3MBTL1, histone methyl-lysine binding proteinENSG000001855139
Q969R5 / L3MBTL2 / L3MBTL2, polycomb repressive complex 1 subunitENSG000001003957
MBTD1 / Q05BQ5 / mbt domain containing 1ENSG000000112584


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021987  SLED domain
 IPR033763  Polycomb group protein, RNA binding region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr