ENSMUSG00000044770


Mus musculus

Features
Gene ID: ENSMUSG00000044770
  
Biological name :Scml4
  
Synonyms : Q80VG1 / Scml4 / Scm polycomb group protein like 4
  
Possible biological names infered from orthology : Q8N228
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: B2
Gene start: 42860370
Gene end: 42960780
  
Corresponding Affymetrix probe sets: 10362861 (MoGene1.0st)   1427417_at (Mouse Genome 430 2.0 Array)   1427545_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000122585
Ensembl peptide - ENSMUSP00000101133
Ensembl peptide - ENSMUSP00000101134
Ensembl peptide - ENSMUSP00000118910
Ensembl peptide - ENSMUSP00000053157
NCBI entrez gene - 268297     See in Manteia.
MGI - MGI:2446140
RefSeq - XM_017313949
RefSeq - NM_001359265
RefSeq - NM_172938
RefSeq - XM_006512750
RefSeq - XM_006512751
RefSeq - XM_006512752
RefSeq - XM_006512753
RefSeq - XM_011243174
RefSeq Peptide - NP_001346194
RefSeq Peptide - NP_001346195
RefSeq Peptide - NP_766526
swissprot - D3Z791
swissprot - D3YY47
swissprot - D3Z554
swissprot - Q80VG1
Ensembl - ENSMUSG00000044770
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scml4ENSDARG00000017266Danio rerio
 SCML4ENSGALG00000015309Gallus gallus
 SCML4ENSG00000146285Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Scmh1 / Q8K214 / Polycomb protein SCMH1 / Q96GD3* / Scm polycomb group protein homolog 1*ENSMUSG0000000008543
Q9JMD1 / Sfmbt1 / Scm-like with four MBT domains protein 1 / Q9UHJ3* / Scm like with four mbt domains 1*ENSMUSG0000000652723
Sfmbt2 / Scm-like with four mbt domains 2 / Q5VUG0*ENSMUSG0000006118622
Scml2 / Scm polycomb group protein like 2 / Q9UQR0*ENSMUSG0000000003720
L3mbtl4 / lethal(3)malignant brain tumor-like protein 4 / Q8NA19* / L3MBTL4, histone methyl-lysine binding protein*ENSMUSG0000004156515
A2A5N8 / L3mbtl1 / Lethal(3)malignant brain tumor-like protein 1 / Q9Y468* / L3MBTL1, histone methyl-lysine binding protein*ENSMUSG0000003557614
Q8BLB7 / L3mbtl3 / Mus musculus L3MBTL3 histone methyl-lysine binding protein (L3mbtl3), transcript variant 3, mRNA. / Q96JM7* / L3MBTL3, histone methyl-lysine binding protein*ENSMUSG0000003908913
P59178 / L3mbtl2 / Lethal(3)malignant brain tumor-like protein 2 / Q969R5* / L3MBTL2, polycomb repressive complex 1 subunit*ENSMUSG000000223947
Mbtd1 / Q6P5G3 / MBT domain-containing protein 1 / Q05BQ5* / mbt domain containing 1*ENSMUSG000000594744


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021987  SLED domain
 IPR033763  Polycomb group protein, RNA binding region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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