ENSGALG00000030889


Gallus gallus

Features
Gene ID: ENSGALG00000030889
  
Biological name :FOXA2
  
Synonyms : FOXA2 / hepatocyte nuclear factor 3-beta
  
Possible biological names infered from orthology : forkhead box A2 / Mus musculus forkhead box A2 (Foxa2), transcript variant 3, mRNA. / P35583 / Q9Y261
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 3365542
Gene end: 3369041
  
Corresponding Affymetrix probe sets: GgaAffx.21785.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044955
NCBI entrez gene - 395539     See in Manteia.
RefSeq - NM_204770
RefSeq Peptide - NP_990101
swissprot - A0A1D5NX62
Ensembl - ENSGALG00000030889
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 foxa2ENSDARG00000003411Danio rerio
 FOXA2ENSG00000125798Homo sapiens
 Foxa2ENSMUSG00000037025Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FOXA1 / forkhead box A1 / P35582* / P55317* / Hepatocyte nuclear factor 3-alpha *ENSGALG0000003271359
FOXB1 / forkhead box B1 / Q64732* / Q99853* / Forkhead box protein B1 *ENSGALG0000002749825
FOXB2 / forkhead box B2 / Q5VYV0* / Q64733* / Forkhead box protein B2 *ENSGALG0000002881922
FOXI1 / forkhead box I1 / Q12951* / Q922I5* / Forkhead box protein I1 *ENSGALG0000000210521
FOXI3 / forkhead box I3 / A8MTJ6*ENSGALG0000003745719
FOXL2 / forkhead box L2 / O88470* / P58012* / Forkhead box protein L2 *ENSGALG0000002928218
FOXL1 / forkhead box L1 / Q12952* / Q64731* / Forkhead box protein L1 *ENSGALG0000002927816
FOXS1 / forkhead box S1 / O43638* / Q61574* / Forkhead box protein S1 *ENSGALG0000004301516


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR013638  Fork-head N-terminal
 IPR018122  Fork head domain conserved site1
 IPR018533  Forkhead box protein, C-terminal
 IPR030456  Fork head domain conserved site 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0010719 negative regulation of epithelial to mesenchymal transition IEA
 biological_processGO:0030193 regulation of blood coagulation IEA
 biological_processGO:0031018 endocrine pancreas development IEA
 biological_processGO:0043433 negative regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0071542 dopaminergic neuron differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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