ENSGALG00000033062


Gallus gallus

Features
Gene ID: ENSGALG00000033062
  
Biological name :PDE6D
  
Synonyms : PDE6D / phosphodiesterase 6D
  
Possible biological names infered from orthology : O43924 / O55057 / Retinal rod rhodopsin-sensitive cGMP 3,5-cyclic phosphodiesterase subunit delta
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 15387344
Gene end: 15417542
  
Corresponding Affymetrix probe sets: Gga.5300.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046798
Ensembl peptide - ENSGALP00000061850
NCBI entrez gene - 424932     See in Manteia.
RefSeq - XM_015291499
swissprot - A0A1D5P2A3
swissprot - A0A1L1RSR3
Ensembl - ENSGALG00000033062
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pde6dENSDARG00000074892Danio rerio
 PDE6DENSG00000156973Homo sapiens
 Pde6dENSMUSG00000026239Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008015  GMP phosphodiesterase, delta subunit
 IPR014756  Immunoglobulin E-set
 IPR017287  Retinal rod rhodopsin-sensitive cGMP 3", 5"-cyclic phosphodiesterase, delta subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0005095 GTPase inhibitor activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
ARL13B-mediated ciliary trafficking of INPP5E


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001964 INPP5E / inositol polyphosphate-5-phosphatase E / Q9JII1* / Q9NRR6* / 72 kDa inositol polyphosphate 5-phosphatase *  / complex / reaction
 ENSGALG00000015412 ARL13B / ADP ribosylation factor like GTPase 13B / Q3SXY8* / Q640N2* / ADP-ribosylation factor-like protein 13B *  / complex / reaction






 

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