ENSGALG00000033099


Gallus gallus

Features
Gene ID: ENSGALG00000033099
  
Biological name :PAPOLA
  
Synonyms : PAPOLA
  
Possible biological names infered from orthology : P51003 / PAPOLB / poly(A) polymerase alpha / poly(A) polymerase beta / Q61183 / Q9NRJ5
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 46556831
Gene end: 46596658
  
Corresponding Affymetrix probe sets: Gga.4316.1.S1_at (Chicken Array)   Gga.4316.2.S1_a_at (Chicken Array)   GgaAffx.13197.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048061
Ensembl peptide - ENSGALP00000053070
NCBI entrez gene - 395878     See in Manteia.
RefSeq - XM_015287291
RefSeq - XM_015287287
RefSeq - XM_015287288
RefSeq - XM_015287289
RefSeq - NM_001198601
RefSeq - XM_015287286
RefSeq Peptide - NP_001185530
swissprot - A0A1D5PJS4
swissprot - A0A1D5P5T8
Ensembl - ENSGALG00000033099
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 papolaENSDARG00000009585Danio rerio
 P51003ENSG00000090060Homo sapiens
 PAPOLBENSG00000218823Homo sapiens
 PapolaENSMUSG00000021111Mus musculus
 PapolbENSMUSG00000074817Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PAPOLG / poly(A) polymerase gamma / Q6PCL9* / Q9BWT3*ENSGALG0000000785324


Protein motifs (from Interpro)
Interpro ID Name
 IPR002934  Polymerase, nucleotidyl transferase domain
 IPR007010  Poly(A) polymerase, RNA-binding domain
 IPR007012  Poly(A) polymerase, central domain
 IPR011068  Nucleotidyltransferase, class I-like, C-terminal
 IPR014492  Poly(A) polymerase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031123 RNA 3"-end processing IEA
 biological_processGO:0043631 RNA polyadenylation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004652 polynucleotide adenylyltransferase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
mRNA Splicing - Major Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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