ENSGALG00000033259


Gallus gallus

Features
Gene ID: ENSGALG00000033259
  
Biological name :SRSF5A
  
Synonyms : SRSF5A
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 28316651
Gene end: 28333242
  
Corresponding Affymetrix probe sets: Gga.20051.1.S1_at (Chicken Array)   Gga.4845.1.S1_at (Chicken Array)   Gga.4845.3.S1_at (Chicken Array)   Gga.4845.3.S1_s_at (Chicken Array)   GgaAffx.12103.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047413
Ensembl peptide - ENSGALP00000061394
NCBI entrez gene - 423265     See in Manteia.
RefSeq - NM_001006476
RefSeq - XM_015287323
RefSeq Peptide - NP_001006476
swissprot - A0A1L1RRH0
swissprot - A0A1D5P407
Ensembl - ENSGALG00000033259
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srsf5aENSDARG00000029818Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SRSF5 / serine and arginine rich splicing factor 5 / O35326* / Q13243* / serine/arginine-rich splicing factor 5*ENSGALG0000000942163
SRSF6 / splicing factor, arginine/serine-rich 6 / Q13247* / Q3TWW8* / serine/arginine-rich splicing factor 6* / serine and arginine rich splicing factor 6*ENSGALG0000000099059
SRSF1 / serine and arginine rich splicing factor 1 / Q07955* / Q6PDM2* / Serine/arginine-rich splicing factor 1 *ENSGALG0000000552531
SRSF4* / Q08170* / serine/arginine-rich splicing factor 4* / serine and arginine rich splicing factor 4*ENSGALG0000003753921


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr