ENSGALG00000034325


Gallus gallus

Features
Gene ID: ENSGALG00000034325
  
Biological name :RBFOX1
  
Synonyms : RBFOX1 / RNA binding fox-1 homolog 1
  
Possible biological names infered from orthology : Q9JJ43 / Q9NWB1 / RNA binding 1
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 10919808
Gene end: 11054404
  
Corresponding Affymetrix probe sets: Gga.12199.1.S1_at (Chicken Array)   Gga.12199.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053578
Ensembl peptide - ENSGALP00000054157
NCBI entrez gene - 416645     See in Manteia.
RefSeq - XM_414942
RefSeq - XM_015294594
RefSeq - XM_015294595
RefSeq - XM_004945328
RefSeq - XM_004945332
RefSeq - XM_004945333
RefSeq - XM_004945336
RefSeq - XM_004945337
RefSeq - XM_004945338
RefSeq - XM_004945340
RefSeq - XM_004945342
RefSeq - XM_015294588
RefSeq - XM_015294589
RefSeq - XM_015294590
RefSeq - XM_015294591
RefSeq - XM_015294592
RefSeq - XM_015294593
swissprot - A0A1D5PMS0
swissprot - A0A1D5PL64
Ensembl - ENSGALG00000034325
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q642J5ENSDARG00000014746Danio rerio
 Q9NWB1ENSG00000078328Homo sapiens
 Q9JJ43ENSMUSG00000008658Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBFOX2 / RNA binding fox-1 homolog 2 / O43251* / Q8BP71* / Mus musculus RNA binding protein, fox-1 homolog (C. elegans) 2 (Rbfox2), transcript variant 10, mRNA.*ENSGALG0000001254061
RBFOX3 / RNA binding fox-1 homolog 3 / A6NFN3* / Q8BIF2* / RNA binding 3 *ENSGALG0000003288955


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR017325  RNA binding protein Fox-1
 IPR025670  Fox-1 C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0043484 regulation of RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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