ENSGALG00000034426


Gallus gallus

Features
Gene ID: ENSGALG00000034426
  
Biological name :TRIM32
  
Synonyms : TRIM32 / tripartite motif containing 32
  
Possible biological names infered from orthology : Q13049 / Q8CH72
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 3818049
Gene end: 3819992
  
Corresponding Affymetrix probe sets: GgaAffx.4406.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057077
NCBI entrez gene - 101748429     See in Manteia.
RefSeq - XM_015279692
RefSeq - XM_015279693
RefSeq - XM_015279694
swissprot - A0A1D5PVU9
Ensembl - ENSGALG00000034426
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q13049ENSG00000119401Homo sapiens
 Q8CH72ENSMUSG00000051675Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NHLRC4 / NHL repeat containing 4 / P0CG21* / Q3UP44* / NHL-repeat-containing protein 4 *ENSGALG000000453179


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001258  NHL repeat
 IPR001841  Zinc finger, RING-type
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013017  NHL repeat, subgroup
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0001894 tissue homeostasis IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0007014 actin ubiquitination IEA
 biological_processGO:0009411 response to UV IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030307 positive regulation of cell growth IEA
 biological_processGO:0030335 positive regulation of cell migration IEA
 biological_processGO:0032897 negative regulation of viral transcription IEA
 biological_processGO:0034612 response to tumor necrosis factor IEA
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0045444 fat cell differentiation IEA
 biological_processGO:0045666 positive regulation of neuron differentiation IEA
 biological_processGO:0045732 positive regulation of protein catabolic process IEA
 biological_processGO:0045787 positive regulation of cell cycle IEA
 biological_processGO:0045862 positive regulation of proteolysis IEA
 biological_processGO:0046716 muscle cell cellular homeostasis IEA
 biological_processGO:0048147 negative regulation of fibroblast proliferation IEA
 biological_processGO:0050769 positive regulation of neurogenesis IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IEA
 biological_processGO:0051155 positive regulation of striated muscle cell differentiation IEA
 biological_processGO:0061564 axon development IEA
 biological_processGO:1902187 negative regulation of viral release from host cell IEA
 biological_processGO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage IEA
 biological_processGO:1903265 positive regulation of tumor necrosis factor-mediated signaling pathway IEA
 biological_processGO:1903883 positive regulation of interleukin-17-mediated signaling pathway IEA
 biological_processGO:1903886 positive regulation of chemokine (C-C motif) ligand 20 production IEA
 biological_processGO:2000147 positive regulation of cell motility IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005863 striated muscle myosin thick filament IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0017022 myosin binding IEA
 molecular_functionGO:0031369 translation initiation factor binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0043130 ubiquitin binding IEA
 molecular_functionGO:0043621 protein self-association IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Regulation of innate immune responses to cytosolic DNA
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000041129 TMEM173 / stimulator of interferon genes protein / Q86WV6* / Q3TBT3* / transmembrane protein 173* / Stimulator of interferons protein *  / complex / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction






 

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