ENSGALG00000036017


Gallus gallus

Features
Gene ID: ENSGALG00000036017
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : NCOA2 / nuclear receptor coactivator 2 / Q15596 / Q61026
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 116927519
Gene end: 117004105
  
Corresponding Affymetrix probe sets: Gga.14716.1.S1_at (Chicken Array)   Gga.9808.1.S1_s_at (Chicken Array)   GgaAffx.24729.1.S1_at (Chicken Array)   GgaAffx.24729.1.S1_s_at (Chicken Array)   GgaAffx.24729.2.S1_s_at (Chicken Array)   GgaAffx.24729.4.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053171
NCBI entrez gene - 420176     See in Manteia.
RefSeq - XM_015282896
RefSeq - XM_015282897
RefSeq - XM_015282898
RefSeq - XM_015282899
RefSeq - XM_015282900
RefSeq - XM_015282895
swissprot - A0A1D5PK20
Ensembl - ENSGALG00000036017
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ncoa2ENSDARG00000017929Danio rerio
 NCOA2ENSG00000140396Homo sapiens
 Ncoa2ENSMUSG00000005886Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NCOA3 / nuclear receptor coactivator 3 / Q9Y6Q9*ENSGALG0000000457060
NCOA1 / nuclear receptor coactivator 1 / P70365* / Q15788*ENSGALG0000001661758
NCOA2* / Q15596* / Q61026* / nuclear receptor coactivator 2*ENSGALG000000459950


Protein motifs (from Interpro)
Interpro ID Name
 IPR000014  PAS domain
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR013767  PAS fold
 IPR017426  Nuclear receptor coactivator
 IPR028822  Nuclear receptor coactivator 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
Recycling of bile acids and salts
Synthesis of bile acids and bile salts
Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
Synthesis of bile acids and bile salts via 27-hydroxycholesterol
Endogenous sterols
HATs acetylate histones
Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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