ENSGALG00000036530


Gallus gallus

Features
Gene ID: ENSGALG00000036530
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : pre-mRNA processing factor 19 / PRPF19 / Q99KP6 / Q9UMS4
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 5775
Gene end: 9901
  
Corresponding Affymetrix probe sets: Gga.8361.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044552
Ensembl peptide - ENSGALP00000058486
NCBI entrez gene - 107053341     See in Manteia.
RefSeq - XM_015286133
swissprot - A0A1D5NW20
swissprot - A0A1D5PZS0
Ensembl - ENSGALG00000036530
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prpf19ENSDARG00000015239Danio rerio
 PRPF19ENSG00000110107Homo sapiens
 Prpf19ENSMUSG00000024735Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRPF4 / pre-mRNA processing factor 4 / O43172* / Q9DAW6*ENSGALG0000000885716
SPAG16 / sperm associated antigen 16 / Q8K450* / Q8N0X2* / Sperm-associated antigen 16 protein *ENSGALG0000000314816


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001680  WD40 repeat
 IPR003613  U box domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013915  Pre-mRNA-splicing factor 19
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA


Pathways (from Reactome)
Pathway description
Formation of TC-NER Pre-Incision Complex
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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