ENSGALG00000037067


Gallus gallus

Features
Gene ID: ENSGALG00000037067
  
Biological name :EIF3E
  
Synonyms : EIF3E / eukaryotic translation initiation factor 3 subunit E
  
Possible biological names infered from orthology : P60228 / P60229
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 132258658
Gene end: 132279130
  
Corresponding Affymetrix probe sets: Gga.4804.1.S1_at (Chicken Array)   GgaAffx.11932.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049032
Ensembl peptide - ENSGALP00000062361
Ensembl peptide - ENSGALP00000060853
Ensembl peptide - ENSGALP00000059397
Ensembl peptide - ENSGALP00000057793
Ensembl peptide - ENSGALP00000052766
NCBI entrez gene - 420272     See in Manteia.
RefSeq - NM_001006349
RefSeq Peptide - NP_001006349
swissprot - A0A1D5PXU6
swissprot - A0A1L1RPY6
swissprot - A0A1D5P8I4
swissprot - A0A1D5PIX9
swissprot - A0A1L1RKX8
Ensembl - ENSGALG00000037067
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 eif3eaENSDARG00000090697Danio rerio
 eif3ebENSDARG00000002549Danio rerio
 EIF3EENSG00000104408Homo sapiens
 Eif3eENSMUSG00000022336Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR016650  Eukaryotic translation initiation factor 3 subunit E
 IPR019010  Eukaryotic translation initiation factor 3 subunit E, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
 biological_processGO:0001732 formation of cytoplasmic translation initiation complex IEA
 biological_processGO:0002183 cytoplasmic translational initiation IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 biological_processGO:0045727 positive regulation of translation IEA
 biological_processGO:1902416 positive regulation of mRNA binding IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IEA
 cellular_componentGO:0016282 eukaryotic 43S preinitiation complex IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0016605 PML body IEA
 cellular_componentGO:0033290 eukaryotic 48S preinitiation complex IEA
 cellular_componentGO:0071540 eukaryotic translation initiation factor 3 complex, eIF3e IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA
 molecular_functionGO:0045296 cadherin binding IEA
 molecular_functionGO:0047485 protein N-terminus binding IEA


Pathways (from Reactome)
Pathway description
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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