ENSGALG00000038721


Gallus gallus

Features
Gene ID: ENSGALG00000038721
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : MAP1LC3A / microtubule associated protein 1 light chain 3 alpha / Microtubule-associated proteins 1A/1B light chain 3A / Q91VR7 / Q9H492
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 1421187
Gene end: 1434289
  
Corresponding Affymetrix probe sets: Gga.3998.1.S1_at (Chicken Array)   Gga.5041.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051634
NCBI entrez gene - 419142     See in Manteia.
RefSeq - XM_417327
swissprot - A0A1D5PFR7
Ensembl - ENSGALG00000038721
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 map1lc3aENSDARG00000033609Danio rerio
 Q9H492ENSG00000101460Homo sapiens
 Q91VR7ENSMUSG00000027602Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MAP1LC3B / A6NCE7* / Q9CQV6* / Q9GZQ8* / MAP1LC3B2* / microtubule associated protein 1 light chain 3 beta* / microtubule associated protein 1 light chain 3 beta 2* / Microtubule-associated ...ENSGALG0000004310584
MAP1LC3C / microtubule associated protein 1 light chain 3 gamma / Q9BXW4*ENSGALG0000001074155
GABARAPL2 / GABA type A receptor associated protein like 2 / P60520* / P60521* / Gamma-aminobutyric acid receptor-associated protein-like 2 *ENSGALG0000000320837
GABARAPL1 / GABA type A receptor associated protein like 1 / Q8R3R8* / Q9H0R8* / Gamma-aminobutyric acid receptor-associated protein-like 1 *ENSGALG0000001472333


Protein motifs (from Interpro)
Interpro ID Name
 IPR004241  Autophagy protein Atg8 ubiquitin-like
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA


Pathways (from Reactome)
Pathway description
Macroautophagy
Pink/Parkin Mediated Mitophagy
Receptor Mediated Mitophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002345 ATG12 / autophagy related 12 / O94817* / Q9CQY1* / Ubiquitin-like protein ATG12 *  / reaction / complex
 ENSGALG00000028187 E1BWM5 / FUNDC1 / FUN14 domain-containing protein 1 / Q8IVP5* / Q9DB70* / FUN14 domain containing 1*  / complex / reaction






 

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