ENSGALG00000039206


Gallus gallus

Features
Gene ID: ENSGALG00000039206
  
Biological name :ARID5A
  
Synonyms : ARID5A / AT-rich interaction domain 5A
  
Possible biological names infered from orthology : AT-rich interactive domain-containing protein 5A / Q03989 / Q3U108
  
Species: Gallus gallus
  
Chr. number: 22
Strand: -1
Band:
Gene start: 2802815
Gene end: 2806073
  
Corresponding Affymetrix probe sets: GgaAffx.11305.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051487
NCBI entrez gene - 101749459     See in Manteia.
RefSeq - XM_015297450
RefSeq - XM_015297451
RefSeq - XM_015297452
swissprot - A0A1D5PFC4
Ensembl - ENSGALG00000039206
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arid5aENSDARG00000077120Danio rerio
 ARID5AENSG00000196843Homo sapiens
 Arid5aENSMUSG00000037447Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARID5B / AT-rich interactive domain-containing protein 5B / Q14865* / Q8BM75* / AT-rich interaction domain 5B*ENSGALG0000003153431
ARID4B / AT-rich interaction domain 4B / A2CG63* / Q4LE39* / AT-rich interactive domain-containing protein 4B *ENSGALG0000003400315
ARID4A / AT-rich interactive domain-containing protein 4A / P29374* / AT-rich interaction domain 4A* / AT rich interactive domain 4A (RBP1-like)*ENSGALG0000001203713


Protein motifs (from Interpro)
Interpro ID Name
 IPR001606  ARID DNA-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0071391 cellular response to estrogen stimulus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0030331 estrogen receptor binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046965 retinoid X receptor binding IEA
 molecular_functionGO:0046966 thyroid hormone receptor binding IEA
 molecular_functionGO:0050681 androgen receptor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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