ENSGALG00000031534


Gallus gallus

Features
Gene ID: ENSGALG00000031534
  
Biological name :ARID5B
  
Synonyms : ARID5B / AT-rich interactive domain-containing protein 5B
  
Possible biological names infered from orthology : AT-rich interaction domain 5B / Q14865 / Q8BM75
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 8297642
Gene end: 8403485
  
Corresponding Affymetrix probe sets: GgaAffx.12668.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058028
NCBI entrez gene - 423661     See in Manteia.
RefSeq - XM_015288128
RefSeq - NM_001031220
RefSeq - XM_015288125
RefSeq - XM_015288127
RefSeq - XM_015288120
RefSeq - XM_015288121
RefSeq - XM_015288122
RefSeq - XM_015288123
RefSeq - XM_015288124
RefSeq Peptide - NP_001026391
swissprot - A0A1D5PYH5
Ensembl - ENSGALG00000031534
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arid5bENSDARG00000037196Danio rerio
 ARID5BENSG00000150347Homo sapiens
 Arid5bENSMUSG00000019947Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARID5A / AT-rich interaction domain 5A / Q03989* / Q3U108* / AT-rich interactive domain-containing protein 5A *ENSGALG0000003920614
ARID4B / AT-rich interaction domain 4B / A2CG63* / Q4LE39* / AT-rich interactive domain-containing protein 4B *ENSGALG0000003400314
ARID4A / AT-rich interactive domain-containing protein 4A / P29374* / AT-rich interaction domain 4A* / AT rich interactive domain 4A (RBP1-like)*ENSGALG0000001203712


Protein motifs (from Interpro)
Interpro ID Name
 IPR001606  ARID DNA-binding domain
 IPR030408  AT-rich interactive domain-containing protein 5B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006807 nitrogen compound metabolic process IEA
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0008585 female gonad development IEA
 biological_processGO:0009791 post-embryonic development IEA
 biological_processGO:0010761 fibroblast migration IEA
 biological_processGO:0030325 adrenal gland development IEA
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0045444 fat cell differentiation IEA
 biological_processGO:0048008 platelet-derived growth factor receptor signaling pathway IEA
 biological_processGO:0048468 cell development IEA
 biological_processGO:0048644 muscle organ morphogenesis IEA
 biological_processGO:0048705 skeletal system morphogenesis IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0060021 roof of mouth development IEA
 biological_processGO:0060325 face morphogenesis IEA
 biological_processGO:0060612 adipose tissue development IEA
 biological_processGO:0060613 fat pad development IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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