ENSGALG00000043103


Gallus gallus

Features
Gene ID: ENSGALG00000043103
  
Biological name :PKNOX2
  
Synonyms : PBX/knotted 1 homeobox 2 / PKNOX2
  
Possible biological names infered from orthology : Homeobox protein PKNOX2 / Q8BG99 / Q96KN3
  
Species: Gallus gallus
  
Chr. number: 24
Strand: -1
Band:
Gene start: 137900
Gene end: 158702
  
Corresponding Affymetrix probe sets: Gga.20020.1.S1_at (Chicken Array)   Gga.20020.1.S1_s_at (Chicken Array)   Gga.3152.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053241
NCBI entrez gene - 374067     See in Manteia.
RefSeq - XM_015297936
RefSeq - NM_204226
RefSeq - XM_015297934
RefSeq - XM_015297935
RefSeq - XM_015297933
RefSeq Peptide - NP_989557
swissprot - Q8AYN2
Ensembl - ENSGALG00000043103
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pknox2ENSDARG00000055349Danio rerio
 PKNOX2ENSG00000165495Homo sapiens
 Pknox2ENSMUSG00000035934Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKNOX1 / PBX/knotted 1 homeobox 1 / O70477* / P55347* / Homeobox protein PKNOX1 *ENSGALG0000001619154
MEIS2 / homeobox protein Meis2 / O14770* / P97367* / Meis homeobox 2*ENSGALG0000003911832
MEIS1 / homeobox protein Meis1 / O00470* / Q60954* / Meis homeobox 1*ENSGALG0000004162630
TGIF2 / TGFB induced factor homeobox 2 / Q8C0Y1* / Q9GZN2*ENSGALG0000002408110
TGIF1 / Q90655 / Homeobox protein AKR / Q15583* / P70284* / TGFB induced factor homeobox 1*ENSGALG0000001479510


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR008422  Homeobox KN domain
 IPR009057  Homeobox-like domain superfamily
 IPR032453  Homeobox protein PKNOX/Meis, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IEA
 cellular_componentGO:0045171 intercellular bridge IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003785 actin monomer binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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